Gene PP_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0184 
SymbolargH 
ID1043710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp235427 
End bp236833 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content63% 
IMG OID637143562 
Productargininosuccinate lyase 
Protein accessionNP_742353 
Protein GI26986928 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0165] Argininosuccinate lyase 
TIGRFAM ID[TIGR00838] argininosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAT CCATGAGCAC CGAGAAGACC AATCAGTCCT GGGGCGGCCG CTTCAGTGAG 
CCCGTCGACG CCTTCGTCGC CCGTTTCACC GCCTCGGTAG ATTTCGACAA GCGCCTGTAC
CGTCACGACA TCATGGGTTC GATTGCCCAT GCCACCATGC TGGCGCAGGT CGGCGTGCTC
AGTGATGCCG AGCGCGACAC CATCATCGAT GGCCTGAAAA CCATCCAGGG CGAGATTGAA
GCCGGCAACT TCGACTGGCG TGTCGACCTC GAAGACGTGC ACATGAACAT CGAAGCACGC
CTGACCGACC GCATCGGCAT CACCGGCAAG AAGCTGCATA CTGGGCGTAG CCGCAACGAC
CAGGTGGCCA CCGACATCCG CCTTTGGCTG CGCGACGAAA TCGACCTGAT CCTGGGCGAA
ATCACCCGCC TGCAGCAGGG CCTGCTGGAG CAGGCAGAGC GTGAAGCCGA AACCATCATG
CCTGGTTTCA CCCACCTGCA GACGGCGCAG CCGGTCACCT TTGGCCACCA CCTGCTGGCG
TGGTTCGAAA TGCTCAGCCG CGACTATGAG CGCCTGGTCG ACTGCCGCAA GCGCACCAAC
CGCATGCCAC TGGGCAGCGC CGCGCTGGCC GGCACCACCT ACCCGATCGA CCGTGAACTG
ACCTGCAAGC TGCTGGGCTT TGAAGCCGTG GCCGGCAACT CGCTGGATGG CGTGTCGGAC
CGTGATTTCG CCATCGAATT CTGCGCCGCT GCCAGCGTGG CGATGATGCA CCTTTCGCGC
TTCTCCGAAG AGCTGGTGCT GTGGACCAGC GCGCAGTTCC AGTTCATCGA CCTTCCGGAC
CGCTTCTGCA CTGGCAGCTC GATCATGCCG CAGAAAAAGA ACCCGGACGT GCCAGAGCTG
GTACGTGGCA AGAGCGGCCG CGTGTTCGGC GCCCTGACCG GCCTGCTGAC CCTGATGAAA
GGCCAACCGC TGGCCTACAA CAAGGACAAC CAGGAAGACA AGGAACCGCT GTTCGACGCC
GCCGATACCC TGCGCGACTC GCTGCGGGCC TTCGCTGACA TGATCCCGGC GATCAAGCCC
AAGCACGCCA TCATGCGTGA AGCGGCCCTG CGCGGTTTCT CCACCGCTAC CGACCTGGCT
GACTATCTGG TTCGCCGTGG CCTGCCGTTC CGTGACTGCC ACGAGATCGT TGGCCACGCG
GTGAAGTATG GTGTGGACAC TGGCAAGGAC CTGGCCGAGA TGAGCCTGGA CGAACTGCGC
CAATTCAGCG ACCAGATCGA GCAGGACGTG TTTGCCGTGC TGACGCTGGA AGGCTCGGTG
AATGCGCGTG ACCACATTGG TGGTACGGCG CCGGCGCAGG TGCGTGCTGC CGTCGTTCGT
GGCAAGGCCC TGTTGGCGTC TCGCTAA
 
Protein sequence
MSESMSTEKT NQSWGGRFSE PVDAFVARFT ASVDFDKRLY RHDIMGSIAH ATMLAQVGVL 
SDAERDTIID GLKTIQGEIE AGNFDWRVDL EDVHMNIEAR LTDRIGITGK KLHTGRSRND
QVATDIRLWL RDEIDLILGE ITRLQQGLLE QAEREAETIM PGFTHLQTAQ PVTFGHHLLA
WFEMLSRDYE RLVDCRKRTN RMPLGSAALA GTTYPIDREL TCKLLGFEAV AGNSLDGVSD
RDFAIEFCAA ASVAMMHLSR FSEELVLWTS AQFQFIDLPD RFCTGSSIMP QKKNPDVPEL
VRGKSGRVFG ALTGLLTLMK GQPLAYNKDN QEDKEPLFDA ADTLRDSLRA FADMIPAIKP
KHAIMREAAL RGFSTATDLA DYLVRRGLPF RDCHEIVGHA VKYGVDTGKD LAEMSLDELR
QFSDQIEQDV FAVLTLEGSV NARDHIGGTA PAQVRAAVVR GKALLASR