Gene PP_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0175 
Symbol 
ID1043701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp226725 
End bp227177 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content67% 
IMG OID637143553 
ProductMarR family transcriptional regulator 
Protein accessionNP_742344 
Protein GI26986919 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTTG ATTTCCTGCG CCTGCAAGTC AGCAGTGGCC TGGTAGTCGC TGCCCGCCAC 
TGGCGGCGCA TCTGTCATAC CGCCTTGACC GGCTACGGCA TTTCCGAGGC CTGCGCTGCG
CCTTTGCTGA TGATCGTGCG CCTGGGCGAC GGCGTGCACC AGGTGGCTGT GGCCCAGGCC
GCCGGCCTGG AAAGCCCGTC GCTGGTACGC CTGCTTGACC AACTGTGCAA AGCTGGCCTG
GTGTGCCGCA GCGAAGACCC ACTGGATCGC CGCGCCAAGG CACTGCGCCT GACTGCCGAA
GGCCGTGCCC TGGCCGAAGC CATTGAAGCC GAACTGGTGC GCTTGCGCCG CGATGTGCTC
GGCGGTATCG ATCAGGCCGA CCTGGAAGCT GCCTTGCGTG TGCTTCGTGC CTTCGAGGCT
GCCGGCCTGG GCAGCGCAGG CGGGGTGGCA TGA
 
Protein sequence
MSLDFLRLQV SSGLVVAARH WRRICHTALT GYGISEACAA PLLMIVRLGD GVHQVAVAQA 
AGLESPSLVR LLDQLCKAGL VCRSEDPLDR RAKALRLTAE GRALAEAIEA ELVRLRRDVL
GGIDQADLEA ALRVLRAFEA AGLGSAGGVA