Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0163 |
Symbol | |
ID | 1043686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 186225 |
End bp | 186914 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637143541 |
Product | GntR family transcriptional regulator |
Protein accession | NP_742332 |
Protein GI | 26986907 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000281276 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCCAAGA AAATCAAATT GAGCAATGTG CTGGCCAGCG AGCAGTTGCC GCCGCATCAG GCCCGTGCCG TGATCGAAGA ACGCCTGCGC AGCGCCATTC TCGATGGTCG CTTGCCCCCT GGTACTGCCG TTCGCCAACA AGAGCTCGCC ACCCTGTACG GCGTCAGTCG CATGCCCGTG CGCGAAGCCC TGCGCCAGCT CGAAGCGCAA TCCCTGTTGA AAGTGGAGAT GCACAAGGGC GCCGTCGTTG CACCGCTGAT CGGCGAGGAT GCAGTGGACA CCTATGCCCT TCGCGTATTG CTCGAGAGCG AGGCGCTGCG CCAGTCTATC CCGCTGCTTG ATGCCAGCGA CATCGCCAGC GCCCGCGGGT ATATCCAGCA ACTGGAGAAC GAGACCAGCC ACACCGAAAT TGGCCGCCTC AACCGCCTGC TCCACATGGC GCTGTACAGC AAGGCGCCGA ACAAGAAACT ACTGCGCCTT ATCGAGAACG AACTGAACGA GGAAGAACGC TTCCTGCGCT TCCATCTTTC GTCCATGGGC CTGGGCAAGC TCACTCAGGA CGATCACAAC GCACTGGTAG ATGCAGCCAG CGACAAGCTG GTGGACGAAG CGGTAGCGGT GCTGGAACGG CACCTCAATG GCGGGGCGCG GGTGATCCGC AATTACCTGG ATACGCAATT GGGGCGTTAG
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Protein sequence | MAKKIKLSNV LASEQLPPHQ ARAVIEERLR SAILDGRLPP GTAVRQQELA TLYGVSRMPV REALRQLEAQ SLLKVEMHKG AVVAPLIGED AVDTYALRVL LESEALRQSI PLLDASDIAS ARGYIQQLEN ETSHTEIGRL NRLLHMALYS KAPNKKLLRL IENELNEEER FLRFHLSSMG LGKLTQDDHN ALVDAASDKL VDEAVAVLER HLNGGARVIR NYLDTQLGR
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