Gene PP_0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0161 
Symbol 
ID1043684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp184654 
End bp185610 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content62% 
IMG OID637143539 
Productanti-FecI sigma factor, FecR 
Protein accessionNP_742330 
Protein GI26986905 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.39146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000661034 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGTCG CACGCCCTGA TACAAAAACG GTCAGGCAGG CCATTCAGTG GATGCTGCGG 
CTGCGTGAGA GCGGGCACGA TCCAGCTCTG CAACAACAGT GCGCGCAATG GCGCAGCAGC
CACCACGAAA ACGAACAGGC CTGGCAGCGT ATGGTTCACC TTCATAAGGA CCTTGACCTG
CGCGCTATCC CGGGTGCCGG GCTGGCATTG CAGACACTGG AAACCAGCCA GCAGCGCCTG
CGCCGTCGAC AGGCGCTGAA GCTGCTTGGC GGCGTTGTCA TGGCAGGGTC GGCGAGCTGG
CTGGCCAAAG ACCTCGATAC TGTGAGTGCC TGGACGTCAG ACTATGCCAC CGGCACGGGC
GAGCGACGCG TCTTCACCCT GCCCGATGGC TCGCTGATGC AACTCAATAC CTGCAGTGCC
GTGGACCTGG CCTTCCATGA TCAACAGCGT CTGGTCCGCC TGAAGCTTGG GGAATTGATG
ATCAACTGCA ACCCCCGGCA TCCCCTACTG GTAGAAACCC GCGACGCGCT GCTGGAAGGC
TTCGAAGGAC GCTTTGTGGC CTATCAGGAT AGCGACTGCA CACGTGTCAG CGTCAGCCAC
GGCAAAGTGG CGATACACCG GCCTGGTGCT GGCCAACTTC AGTGGATCGA AGGTGGCCAG
AACTGGCGCC TGGATGCTCA AGGTGCGCAC CGGCTCGCGC ACATGGACAT GGATGCGATG
GCCTGGACTG AAGGGTTGAT CGTCACTCAG GACATGCGCC TCTCCAACTT CCTCGCGCAG
GTCAGCCGCT ATCGCCATGG TTACCTGGGC TGCAGCAATG AGATTGCCGA CCTGCGCCTG
TCGGGGGTGT TCCGCCTCGA AGACCCGGAG CAACTGCTTC GGCTGCTACC GCAGACGTTG
CCCGTACGAC TTCGTCGGCG TACACGCTGG TGGGTGCATG TAGAGAGCAT CACCTGA
 
Protein sequence
MTVARPDTKT VRQAIQWMLR LRESGHDPAL QQQCAQWRSS HHENEQAWQR MVHLHKDLDL 
RAIPGAGLAL QTLETSQQRL RRRQALKLLG GVVMAGSASW LAKDLDTVSA WTSDYATGTG
ERRVFTLPDG SLMQLNTCSA VDLAFHDQQR LVRLKLGELM INCNPRHPLL VETRDALLEG
FEGRFVAYQD SDCTRVSVSH GKVAIHRPGA GQLQWIEGGQ NWRLDAQGAH RLAHMDMDAM
AWTEGLIVTQ DMRLSNFLAQ VSRYRHGYLG CSNEIADLRL SGVFRLEDPE QLLRLLPQTL
PVRLRRRTRW WVHVESIT