| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0158 |
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| Symbol | gcdH |
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| ID | 1043671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 168402 |
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| End bp | 169583 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637143529 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | NP_742327 |
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| Protein GI | 26986902 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.276992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000982042 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTCGGTA AAGCAAGTTT CAACTGGATC GACCCGTTGC TGCTGGATCA GCAGCTCACT
GAAGAAGAGC GCATGGTGCG TGACAGCGCT TATCAGTTCG CCCAGGACAA GCTGGCGCCG
CGTGTGCTCG AGGCCTTCCG TCACGAGCAG ACCGACCCCG CGATCTTCCG CGAGATGGGT
GAAGTCGGCC TGTTGGGTGC AACCATCCCC GAGCAATACG GTGGCAGCGG CCTGAACTAT
GTGTGCTACG GCCTTATTGC TCGCGAAGTG GAACGCATCG ACTCGGGTTA CCGCTCGATG
ATGAGTGTGC AGTCGTCGCT GGTGATGGTG CCGATCAACG AATTTGGCAC CGAAGCTCAA
AAGCAGAAGT ACCTCCCCAA GCTTGCCAGT GGCGAGTGGA TCGGTTGCTT CGGTTTGACC
GAGCCTAACC ATGGCTCCGA TCCTGGCTCG ATGATTACCC GGGCGAGAAA GGTCGACGGT
GGCTACCGGC TGACCGGCAG CAAGATGTGG ATCACCAACA GCCCCATCGC CGATGTGTTC
GTGGTGTGGG CCAAGGATGA TGCGGGCGAT ATCCGTGGCT TTGTACTGGA AAAAGGCTGG
CAAGGCCTGA GTGCCCCGGC AATTCATGGC AAGGTTGGCC TGCGCGCCTC GATCACTGGC
GAAATCGTCA TGGACAATGT GTTCGTGCCA GAAGAGAACA TCTTCCCGGA CGTGCGTGGC
CTCAAGGGCC CGTTCACCTG CCTGAATTCG GCTCGCTATG GTATTTCGTG GGGTGCGCTG
GGTGCCGCTG AAGCCTGCTG GCACACCGCC CGCCAATACA CCCTGGATCG TCAGCAGTTT
GGTCGTCCAC TGGCCGCCAA CCAGTTGATA CAGAAGAAGC TGGCCGACAT GCAGACCGAA
ATCACCCTGG CGCTGCAGGG CTGCCTGCGT CTGGGGCGCA TGAAGGATGA AGGGACGGCT
GCGGTGGAAA TCACCTCCAT CATGAAGCGC AATTCCTGCG GCAAGGCGCT GGATATCGCC
CGTATGGCGC GTGACATGCT GGGCGGCAAT GGCATCTCCG ACGAGTTTGG TGTGGCCCGC
CACCTGGTTA ACCTGGAGGT GGTCAACACC TATGAAGGTA CCCACGACGT GCATGCACTT
ATCCTGGGGC GTGCGCAGAC TGGTATCCAG GCGTTCTATT AA
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| Protein sequence | MVGKASFNWI DPLLLDQQLT EEERMVRDSA YQFAQDKLAP RVLEAFRHEQ TDPAIFREMG
EVGLLGATIP EQYGGSGLNY VCYGLIAREV ERIDSGYRSM MSVQSSLVMV PINEFGTEAQ
KQKYLPKLAS GEWIGCFGLT EPNHGSDPGS MITRARKVDG GYRLTGSKMW ITNSPIADVF
VVWAKDDAGD IRGFVLEKGW QGLSAPAIHG KVGLRASITG EIVMDNVFVP EENIFPDVRG
LKGPFTCLNS ARYGISWGAL GAAEACWHTA RQYTLDRQQF GRPLAANQLI QKKLADMQTE
ITLALQGCLR LGRMKDEGTA AVEITSIMKR NSCGKALDIA RMARDMLGGN GISDEFGVAR
HLVNLEVVNT YEGTHDVHAL ILGRAQTGIQ AFY
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