Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0146 |
Symbol | |
ID | 1043654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 155577 |
End bp | 156374 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637143518 |
Product | integral membrane protein TerC |
Protein accession | NP_742316 |
Protein GI | 26986891 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.125302 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCCATTAC CGCTCGAAGG AAAATACATG GAATGGCTGA CCAGCCCGGA AATCTGGGTT GCCTTTTTCA CCCTTACCGC GCTTGAGATC GTCCTCGGTA TCGACAACAT CATCATGATC TCGATTCTGG TCAGCCGCAT GCCCAAGCAC ATGCAGCCAC GCACCCGGAT CTTCGGCCTG GCCCTGGCCA TGGTCACCCG TATCATGCTG CTGCTGTCGA TTACCTGGGT CATGCGCCTC ACCGCCGACC TGTTCGTGGT CTTTGGCCAA GGCATCTCCG GGCGTGACCT GATCCTGTTC TTCGGTGGCC TGTTCCTGCT GTGGAAGAGC TCGCAAGAGA TCTACCACGG TCTGGAAGGC GAGGACGAGA ACGTAGAGGA GCCCAAAGGC GCAGGTGGCA AGTTCTTCTA CACCATCATC CAGATCGCCA TCATCGACAT CGTGTTCTCG CTGGACTCGG TGATCACCGC TGTGGGCATG GTTTCCCACG TACCGGTGAT GATCGCCGCC ATCGTTGTGG CCGTGCTGGT GATGATGCTG TGCGCCGGCG CCATCAGCAA TTTCATCGAC AAGCACCCGT CGCTGAAGAT GCTCGCGCTG TCGTTCCTGA TCGTGGTCGG TACTGTACTG ATCGCTGAAG CGTTCGAAGT GCATGTGCCG AAGGGCTATG TCTACTTCGC CATGGCCTTC TCGCTGGCGG TGGAAGCCAT CAACATCCGC ATGCGCACCG CCATGGCCCG CAAGGATGGC AAGGATCATG AACCGGTGAA ACTGCGCAAG GACATTCCGG GTCAATAA
|
Protein sequence | MPLPLEGKYM EWLTSPEIWV AFFTLTALEI VLGIDNIIMI SILVSRMPKH MQPRTRIFGL ALAMVTRIML LLSITWVMRL TADLFVVFGQ GISGRDLILF FGGLFLLWKS SQEIYHGLEG EDENVEEPKG AGGKFFYTII QIAIIDIVFS LDSVITAVGM VSHVPVMIAA IVVAVLVMML CAGAISNFID KHPSLKMLAL SFLIVVGTVL IAEAFEVHVP KGYVYFAMAF SLAVEAINIR MRTAMARKDG KDHEPVKLRK DIPGQ
|
| |