Gene PP_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0132 
Symbol 
ID1043632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp138721 
End bp140502 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content63% 
IMG OID637143504 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionNP_742302 
Protein GI26986877 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGGC CGCCCATGAA GCTGCGTACG CGGCTTTTCC TCAGCATCTC GACGCTCGTC 
ACCGTGGCGT TGCTGGGGCT GCTGCTGGGT CTGGTCAGCA TGCTGCAGAT GGCTACAGTG
CAACAGCGAC TGGTGCGCGA TACCACCCAT GCCCTGGAAG TGGGGCTGAA GTTGCGCCAG
AACCTGGGCG AACAGCTGAT GCTGATTCTC GATGAAGACA CCGCCCCAGA AAGCCTGCGG
CTGCTGCAGG ACAACTTCCA GGACCTGCTC AACCAAGGGC TGGAACAAGG CGGTGAGCGC
ACCGGTTTCA GCAAGGCGAG CAGCAATTAC CAGGCCTTCC TCCAGACCTA TCGCGACAGC
GCCACACCCG CTCGCAGCAT GGGTGTCGAT CAGCCTCTTG GGGCCGCGTT CAATCAGGTG
CGCACCGACC TCATCGATTC CCACAAGCAG GCATTGGACC TGATTACCCG TAGCGAGGAA
CGCACCCGTG ACCGCGCATT GCTGGTCAGT GGTGTACTCG GCCTGATGGG GTTGGTGGTG
TTGGTACTGG GCTTTATCAC CGCGCACAAC ATCGCCCGGC GTTTCGGCCA GCCGATCGAA
GCCTTGGCCA AGGCGGCCGA CCAGTTGGGC AAGGGCAATT TCGATGTGAC CTTGCCGGTC
ACCCAGGCCG CCGAGCTCAA CCAGCTGACC CGCCGTTTTG GTCTGATGGC CGATGCCTTG
CGCAAGCACC AGGCCACCAA CGTCGACGAG CTGCTGGCCG GCCAGCAGCG TTTACAGGCG
GTACTCGACA GCATCGACGA CGGCCTGCTG ATCATCGACC GTCAGGGCCG CCTCGAGCAC
CTCAACCCGG TGGCGCAGCG CCAGCTGGGC TGGAACGACA GCCGCTTGGG CAGCAGCCTG
GTCGAAGCCC TGCAGCGCCC CGAGCTTGAG CAACAACTGC GCCAGGTTCT GCGCGGGGGC
AGCCTCGACC GCCCACCGGA CGACCTGAAC ATGGAGGTCG ATGAAGAATC ACGTCTGCTC
ACCTACAGCC TGACCCCGGT CAGCCACCCG CAGGGACCAA TCCTCGGCGC GGTGATGGTG
CTGCACGATG TGACCGAGCA AAGGGCCTTC GAGCGGGTGC GCAGCGAATT CGTGCTGCGC
GCCTCCCACG AACTGCGTAC CCCGGTGACC GGCATGCACA TGGCCTTCGG CCTGCTGCGC
GAGCGGGTCA AGTTCCCGCC CGAAGCCCGC GAGAACGACC TGCTGGAAAC CATCGGCGAA
GAAATGCAGC GTCTTACCCA ACTGATCAAC GACCTGCTCA ACTTCTCCCG TTATCAGAGC
GGTTTGCAAA AGCTCGAGCT GGCCCCCTGT GCCATCGACG ACCTGCTGGA CCACGCGCAA
TCGCGCTTTG CCGAACAGGC CGCGCACAAG CAGATCGAGT TGATCAAGGA ACTGGACCCG
CCGCTACCGC GTATCCAGGC CGACGTCGCC CAGTTGGACC GAGTGCTGGA CAACCTGCTG
CACAACGCCA TCCGCCATAC CGCCAACGGC GGGCGCATCC GCCTGCATGC CAGACGGCAT
GCAGAACGGG TGATCATCAG CGTCGAGGAC AACGGAGAGG GCATTTCCTA TGGGCAACAA
GCGCGCATCT TCGAGCCTTT CGTGCAGGTA GGTCGCAAGA AAGGCGGCGC TGGGCTGGGG
CTCGCGCTGT GCAAGGAAAT TGTGCAGCTG CACGGCGGGC GCATGGGCGT GTTTTCGCGG
CCGGGGCAGG GGACCCAGTT CTACATGGCG TTGCCGGTCT GA
 
Protein sequence
MKWPPMKLRT RLFLSISTLV TVALLGLLLG LVSMLQMATV QQRLVRDTTH ALEVGLKLRQ 
NLGEQLMLIL DEDTAPESLR LLQDNFQDLL NQGLEQGGER TGFSKASSNY QAFLQTYRDS
ATPARSMGVD QPLGAAFNQV RTDLIDSHKQ ALDLITRSEE RTRDRALLVS GVLGLMGLVV
LVLGFITAHN IARRFGQPIE ALAKAADQLG KGNFDVTLPV TQAAELNQLT RRFGLMADAL
RKHQATNVDE LLAGQQRLQA VLDSIDDGLL IIDRQGRLEH LNPVAQRQLG WNDSRLGSSL
VEALQRPELE QQLRQVLRGG SLDRPPDDLN MEVDEESRLL TYSLTPVSHP QGPILGAVMV
LHDVTEQRAF ERVRSEFVLR ASHELRTPVT GMHMAFGLLR ERVKFPPEAR ENDLLETIGE
EMQRLTQLIN DLLNFSRYQS GLQKLELAPC AIDDLLDHAQ SRFAEQAAHK QIELIKELDP
PLPRIQADVA QLDRVLDNLL HNAIRHTANG GRIRLHARRH AERVIISVED NGEGISYGQQ
ARIFEPFVQV GRKKGGAGLG LALCKEIVQL HGGRMGVFSR PGQGTQFYMA LPV