Gene PP_0130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0130 
Symbol 
ID1043628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp136115 
End bp136903 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content61% 
IMG OID637143502 
ProductN-acetylmuramoyl-L-alanine amidase family protein 
Protein accessionNP_742300 
Protein GI26986875 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTTCCA CGCTTAAAAA AACCCTGATT TCCTTTTTGC TATTGTCTGT CGCCGGTTGC 
TCGACGGGCC TGCGCATCGA CCGCAGTCAC CCTTCGGCCA ATCAGGACAA CCGCATCCAG
TTCGTTGTCC TGCATTACAC CAATGCTTCG CTGGAGCGCT CGCTGGCGCT GCTTACCCAT
GGTGAAGTCA GCAGCCATTA CCTGATCGGC GATGGCCCGG CTACGGTGTA TCAGCTGGTA
GATGAAAACC GTCGCGCCTG GCATGCCGGT GAGAGCCAGT GGCAGGGGCG CACCTGGCTG
AACTCCTCGT CCATTGGTAT CGAGATCGTC AACCCGGGCT TCACCGACAC CCCGAACGGC
CGGGTCTGGC ACCCTTACAG CGAGGCGCAG GTCCAGGCGC TGATCGCGCT GCTCAAGGAC
ATTGTCAAAC GCAACAACAT CGAACCACGC CATATCATCG GCCATAGTGA CATCGCCCCG
CTGCGCAAGC TGGACCCGGG GCCATTGTTC CCGTGGAAGC GCCTGGCCGA CGCCGGGCTG
GGTATCTGGC CGGATGCCAA CGCGGTGGCA CGGCAGCAAG CCTACTTCAG CGTCAACCCG
CCAAGCGTTG GCTGGTACCA GCAGGAGCTG GCACGGTTTG GCTATCAGAT CGAGCAGACC
GGCGTGCTGG ATGTCGCCAC ACGTCATGTG GTCGCCGCCT TCCAGATGCG CTTCCGCCCG
CAGCGCTTCG ACGGTATGCC GGATGCGCAG ACAGCAGCGA TGCTGCAGGT ACTTAACCGC
ATGCGTTGA
 
Protein sequence
MLSTLKKTLI SFLLLSVAGC STGLRIDRSH PSANQDNRIQ FVVLHYTNAS LERSLALLTH 
GEVSSHYLIG DGPATVYQLV DENRRAWHAG ESQWQGRTWL NSSSIGIEIV NPGFTDTPNG
RVWHPYSEAQ VQALIALLKD IVKRNNIEPR HIIGHSDIAP LRKLDPGPLF PWKRLADAGL
GIWPDANAVA RQQAYFSVNP PSVGWYQQEL ARFGYQIEQT GVLDVATRHV VAAFQMRFRP
QRFDGMPDAQ TAAMLQVLNR MR