Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0130 |
Symbol | |
ID | 1043628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 136115 |
End bp | 136903 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637143502 |
Product | N-acetylmuramoyl-L-alanine amidase family protein |
Protein accession | NP_742300 |
Protein GI | 26986875 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTTCCA CGCTTAAAAA AACCCTGATT TCCTTTTTGC TATTGTCTGT CGCCGGTTGC TCGACGGGCC TGCGCATCGA CCGCAGTCAC CCTTCGGCCA ATCAGGACAA CCGCATCCAG TTCGTTGTCC TGCATTACAC CAATGCTTCG CTGGAGCGCT CGCTGGCGCT GCTTACCCAT GGTGAAGTCA GCAGCCATTA CCTGATCGGC GATGGCCCGG CTACGGTGTA TCAGCTGGTA GATGAAAACC GTCGCGCCTG GCATGCCGGT GAGAGCCAGT GGCAGGGGCG CACCTGGCTG AACTCCTCGT CCATTGGTAT CGAGATCGTC AACCCGGGCT TCACCGACAC CCCGAACGGC CGGGTCTGGC ACCCTTACAG CGAGGCGCAG GTCCAGGCGC TGATCGCGCT GCTCAAGGAC ATTGTCAAAC GCAACAACAT CGAACCACGC CATATCATCG GCCATAGTGA CATCGCCCCG CTGCGCAAGC TGGACCCGGG GCCATTGTTC CCGTGGAAGC GCCTGGCCGA CGCCGGGCTG GGTATCTGGC CGGATGCCAA CGCGGTGGCA CGGCAGCAAG CCTACTTCAG CGTCAACCCG CCAAGCGTTG GCTGGTACCA GCAGGAGCTG GCACGGTTTG GCTATCAGAT CGAGCAGACC GGCGTGCTGG ATGTCGCCAC ACGTCATGTG GTCGCCGCCT TCCAGATGCG CTTCCGCCCG CAGCGCTTCG ACGGTATGCC GGATGCGCAG ACAGCAGCGA TGCTGCAGGT ACTTAACCGC ATGCGTTGA
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Protein sequence | MLSTLKKTLI SFLLLSVAGC STGLRIDRSH PSANQDNRIQ FVVLHYTNAS LERSLALLTH GEVSSHYLIG DGPATVYQLV DENRRAWHAG ESQWQGRTWL NSSSIGIEIV NPGFTDTPNG RVWHPYSEAQ VQALIALLKD IVKRNNIEPR HIIGHSDIAP LRKLDPGPLF PWKRLADAGL GIWPDANAVA RQQAYFSVNP PSVGWYQQEL ARFGYQIEQT GVLDVATRHV VAAFQMRFRP QRFDGMPDAQ TAAMLQVLNR MR
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