Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0124 |
Symbol | engB |
ID | 1043619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 130640 |
End bp | 131272 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637143496 |
Product | ribosome biogenesis GTP-binding protein YsxC |
Protein accession | NP_742294 |
Protein GI | 26986869 |
COG category | [R] General function prediction only |
COG ID | [COG0218] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.10118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTCA AGAACCCCAT CCTCGGCCTC TGCCAGAAAG CCAAATTCGC CCTCAGCGCA GCCAAGGTCG AACAATGCCC GGACGACCAG GGTTACGAGG TGGCTTTTGC CGGCCGTTCC AACGCCGGCA AATCCAGCGC CCTCAATACC CTGACCCATG CCAGCCTGGC GCGTACCTCG AAGACTCCCG GGCGCACCCA GCTGTTGAAT TTCTTCAGTC TGGACGATGA ACGGCGTTTG GTCGACCTGC CGGGCTATGG TTATGCAAAA GTCCCGATTC CGCTCAAGCA GCACTGGCAG AAACACCTGG AAGCCTACCT GGGCAGCCGT GAGTGCCTGC GTGGCGTGAT CCTGATGATG GACGTGCGTC ACCCGATGAC CGACTTCGAC AAGATGATGC TCGACTGGGC CAAGGCCAGC AGCATGCCGA TGCACATCCT GCTGACCAAG GCCGACAAGC TGACCCACGG CGCCGGCAAG AACACATTGC TGAAAGTGCA GTCGGAAATC CGCAAGGGCT GGGGGGATGG CGTGACCATC CAGCTGTTCT CGGCACCCAA GCGCCTGGGC GTGGAAGACG CCTACCGTGT GCTGGCGGAC TGGATGGAAC TGGAAGACAA GCCGGTCGTT TAG
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Protein sequence | MQVKNPILGL CQKAKFALSA AKVEQCPDDQ GYEVAFAGRS NAGKSSALNT LTHASLARTS KTPGRTQLLN FFSLDDERRL VDLPGYGYAK VPIPLKQHWQ KHLEAYLGSR ECLRGVILMM DVRHPMTDFD KMMLDWAKAS SMPMHILLTK ADKLTHGAGK NTLLKVQSEI RKGWGDGVTI QLFSAPKRLG VEDAYRVLAD WMELEDKPVV
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