Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0071 |
Symbol | |
ID | 1043552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 81562 |
End bp | 82023 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637143443 |
Product | hypothetical protein |
Protein accession | NP_742241 |
Protein GI | 26986816 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.664883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000574078 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGATCTTGG CAGTCCATGG CGGCTGTTCG CAGGAGGCTT CGTGCCTGCT GGGTTTTAGA TCTCCCACCC GGTTTACCAC CCTGCGTACA GCTGCCACCC ATTCGTGTGG TAACGGACTG GGTGGGGCCA TGAAGCGAGA TCTAGTGATG AAGAAGATTG TTCCTGATCC ACCCCTACCC TGCACCTCCA CCCGCCCCTT CGGCCGCTGC GATGCCGGCC ACGATCCACT CTTCACCGTC AACCCAAACA TTTCTGCCGA GGACGCTCTG GTCCACGTAG CCCTATACCT GCGCAGCGCT TACGAAACCG GCTACAAAGC TTTGGACTAC ATGCGTGAAG AAGGCCGTGG CATGTTCTGG TCGAACCTGC ATGCGATTGA GATGGCAGAG GGTGTGATCG AGGCGATACT CGATGGCATC GAGTCGACGC CATCGCCGTC ACGCCCAGCC TCCAAGGCAT AG
|
Protein sequence | MILAVHGGCS QEASCLLGFR SPTRFTTLRT AATHSCGNGL GGAMKRDLVM KKIVPDPPLP CTSTRPFGRC DAGHDPLFTV NPNISAEDAL VHVALYLRSA YETGYKALDY MREEGRGMFW SNLHAIEMAE GVIEAILDGI ESTPSPSRPA SKA
|
| |