Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0066 |
Symbol | sun |
ID | 1043547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 76233 |
End bp | 77543 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637143438 |
Product | sun protein |
Protein accession | NP_742236 |
Protein GI | 26986811 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000506957 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAACCCAC GCCTCGCCGC CGCCCGTGCG CTGGCCGCTG TGCTCAGCGG CAAGGCTTCG CTGAACAGCT CGCTGCCGGC GCAACTGGAC AAGGTAGATG AACGCGACCG CGGCCTGACC CAGGACCTGG CGTTCGGTAC CGCACGCTGG CAGCCACGCC TCGACCTGCT GGCCGCACAG CTGCTGCAAA AGCCCTTCAA GGCAGCCGAT GCCGATGTTC AGGCGCTGCT GCTGGTCGGC CTGTACCAGC TGTTCTACAC GCGCATTCCG GCCCATGCCG CCATCGGCGA GACCGTGGGC TGTGCCGACA AACTGAAGAA GCCGTGGGCC AAGGGCCTGC TCAATGCCGT GCTGCGCCGT GCCCAGCGCG AAGGCGAGGA GCTGCTCGCC GGCATGGAGC GCGACCCGGT GGTGCGTACC GCGCACCCGC GCTGGCTGCA GAAGGCGCTG AAAGCCTTCT GGCCAGAGCA GTGGGAGGCC ATCTGCGCCG CCAACAATGC CCACCCTCCG ATGATTCTGC GGGTCAACCG CCGTCACCAT AGCCGCGATG CCTACCTGGC ACTGCTGGCC GAAGCCGGCA TCGGCGCCAG CGCATGCCAG TACAGCCGGG ATGGCATCGT GCTGGCCGAA GCCTGCGACG TGCGCGGCCT GCCAGGCTTC GCCGAAGGCT GGGTGAGCGT GCAGGACGAA GCTGCGCAGC TATCTGCCGA CCTGCTGGAA CTGGCCCCCG GCCAACGCGT GCTCGATGCT TGCTGCGCAC CGGGCGGCAA GACCTGCCAC CTGCTGGAGG CCGAGGCTGG CCTGGCGAAC ATGGTGGCCA TCGACCTCGA AGCCAAGCGC CTGACCCGCG TGCGAGAAAA CCTCGACCGC CTGCAACTGG ACGCCGAGCT GATCGCCTGC GATGCCCGCG ACACTGCCAG CTGGTGGGAC GGCAAGCCAT TCCAGCGCAT TCTGCTCGAC GCGCCGTGCT CGGCCACCGG CGTGATTCGC CGCCACCCGG ACATCAAGAT GACCCGCCAA GCCGACGACA TCCCGGCTTT GGCCACGCTG CAAGGCGAGC TGCTCGATGC CCTGTGGCCG ACCCTGGAAG TGGGCGGCAT GCTGCTATAC GCCACCTGCT CCACATTGCC GACCGAGAAC ACTGAAGTGA TCAAAGCCTT CCTCGCGCGC ACCCCGGGCG CTCGTGAGCT GGACCTGGCG ACCGAAGCCG GCCTGCGCCA GCCCCACGGC CGTCAGTTGC TGGCCCAGGA AGGCGGCCAC GACGGTTTCT ACTATGCCAA GCTGATCAAG ATCGCCGCCT CGCGCGGATA A
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Protein sequence | MNPRLAAARA LAAVLSGKAS LNSSLPAQLD KVDERDRGLT QDLAFGTARW QPRLDLLAAQ LLQKPFKAAD ADVQALLLVG LYQLFYTRIP AHAAIGETVG CADKLKKPWA KGLLNAVLRR AQREGEELLA GMERDPVVRT AHPRWLQKAL KAFWPEQWEA ICAANNAHPP MILRVNRRHH SRDAYLALLA EAGIGASACQ YSRDGIVLAE ACDVRGLPGF AEGWVSVQDE AAQLSADLLE LAPGQRVLDA CCAPGGKTCH LLEAEAGLAN MVAIDLEAKR LTRVRENLDR LQLDAELIAC DARDTASWWD GKPFQRILLD APCSATGVIR RHPDIKMTRQ ADDIPALATL QGELLDALWP TLEVGGMLLY ATCSTLPTEN TEVIKAFLAR TPGARELDLA TEAGLRQPHG RQLLAQEGGH DGFYYAKLIK IAASRG
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