Gene PMT9312_1799 details

Gene Information

• Locus tag: PMT9312_1799
• Symbol: rpsF
• ID: 3766626
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: +
• Start bp: 1695716
• End bp: 1696174
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637798345
• Product: 30S ribosomal protein S6
• Protein accession: YP_398296
• Protein GI: 78780184
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0360] Ribosomal protein S6
• TIGRFAM ID: [TIGR00166] ribosomal protein S6

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAATC AATCTTACTA TGAAACCATG TACATCCTCC GCCCAGATAT CGCGGAAGAT 
GAAGTAACCA ATCATATTGA TAAATACAAT AAGCTTTTAG AAGAATTTGG CGGAACCATC 
CTTGATAGTC AAATGCGAGG TAAGCGAAGA TTAGCTTATC AAATTGCCAA ACATAGAGAA 
GGTATTTACG TCCAACTAAG TCATCAAGGT GATGGGCAAC ATATTTTCAA AATTGAAAAA 
GCAATGAGAA TTAGTGAAGA TGTTATTAGA TATATGACCG TTAAACAAGA AGGGCCTTTA 
CCTACTCCAA AACCTTCAAA TAAGAGTTCA ACTCAATCAG AAAATAAAGA TAATCCAGAA 
ACTAAAGTTG AATCTAAAGA AGAGCAATCA GTAACAAACT CTGATACTTC AACAACAAAA 
AAAGACGATA ATGAAATTAA AGAAAATACA GAATCTTAG 

 

Protein sequence

MTNQSYYETM YILRPDIAED EVTNHIDKYN KLLEEFGGTI LDSQMRGKRR LAYQIAKHRE 
GIYVQLSHQG DGQHIFKIEK AMRISEDVIR YMTVKQEGPL PTPKPSNKSS TQSENKDNPE 
TKVESKEEQS VTNSDTSTTK KDDNEIKENT ES