Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1798 |
Symbol | aroE |
ID | 3766625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 1694751 |
End bp | 1695611 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637798344 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_398295 |
Protein GI | 78780183 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTCAA GTAAGACCTC TTTTATTGCA TTAATCGGCA ATCCAGTAAG CCATTCTTTG TCGCCAATCA TGCAAAATGC TGCCCTTCAG TATTTAGGCT TAGATTTAAT TTATATTGCT ATGCCTTGTA AAGATGAAGA TCTAGAACTA GTTATGAATT CTTTGAAAAA AATTAATTGC AAAGGTTTAA ATATTACAAT TCCCCATAAA GAAAAAGTAT TTGACCTTTG TAGTGAAATT TCTCCTATTG CTAATAAACT GAAAGCAATT AATACCTTAA AATTAAACTC TGCAAAAGAA TGGAGCGCAA CTAATACAGA TGTTGAGGGA TTTATTTATC CATTAAAAAC ATTAAATTTA ACAAAGAAAC AATCGATCGT TCTTGGCTCG GGTGGTGCAG CAAGATCTGT TATTCAAGGA TTAATAAATT TAAATTTTTC TACAATTTCA GTAGTATCAC GTAACAAGTC ATCACTAGAT GAATTAATAA AAAATTTTGA AAATCAAATT ACAATTGAGG GTTTGTTAAA TAATGATAAT AGGACTGAAA CTTTAATTGA AGAGGCAGAT TTAATTGTAA ATACAACACC TGTAGGAATG AAAACAACTA AACATGAGAT GAATGTATTG CCATATGGGG ACGTATTTTG GAGATCTCTT AACTCGAAAA CAATTGTTTA CGATTTAATC TACAATCCTG CTCCAACTCC TCTATTGAAA TTTAGTGCCA AAAAAGGATG CATAACTATC GATGGTCTCA AAATGCTTGT TGCTCAAGGA GCGAAATCAT TATCATTTTG GACAAATGGT TTAGAAGTAC CTTTTCATAT TATGAATGAC GCATTAAAAA ATTATCTTTA A
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Protein sequence | MISSKTSFIA LIGNPVSHSL SPIMQNAALQ YLGLDLIYIA MPCKDEDLEL VMNSLKKINC KGLNITIPHK EKVFDLCSEI SPIANKLKAI NTLKLNSAKE WSATNTDVEG FIYPLKTLNL TKKQSIVLGS GGAARSVIQG LINLNFSTIS VVSRNKSSLD ELIKNFENQI TIEGLLNNDN RTETLIEEAD LIVNTTPVGM KTTKHEMNVL PYGDVFWRSL NSKTIVYDLI YNPAPTPLLK FSAKKGCITI DGLKMLVAQG AKSLSFWTNG LEVPFHIMND ALKNYL
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