Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1760 |
Symbol | |
ID | 3766586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 1650646 |
End bp | 1653555 |
Gene Length | 2910 bp |
Protein Length | 969 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637798305 |
Product | glycine dehydrogenase |
Protein accession | YP_398257 |
Protein GI | 78780145 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCCA CCGTTAATTC AGATTTATTT ATTAATAGAC ACCTTGGTTT GAGTGATGTT GATGAGCAGA AAATGCTCTC TAAGATTGGT TTTAATAATA TTGATCAATT TATAAATCAA GTTATTCCTG AAGATATTCA GCTTAACGAT AAATCTTCAG AAATATTGCC CCAAGGTTGC TCAGAAATTG AGGCTTTAAA TGAATTAGAA GAGATTGCGA ATAAAAACAC CAAAATGAGA TCCTTAATAG GGCTTGGTTA TTATGACAAT CACATGCCTA AAGTAATTCA AAAGCATGTG CTTGAAAATC CTAGGTGGTA CACGTCTTAT ACTCCATACC AAGCAGAAAT TGCACAAGGA AGATTAGAAG CTCTTTTTAA TTTTCAGACT ATTGTTTGTG AACTGACAGG ATTCCCTATC GCCAATGCAT CTTTGTTAGA TGAGGGCACT GCTGCTGCTG AAGCTATGGC CATGAGTTTT GCGGCAAGAA AAAATAAATC TTCAAAACTT TATTTGGTGG AATCAAATGT TTTTGACCAT ACTTTCAATG TTCTACAAAC CAGAGCAAAA CCTTTGGGAA TATCCTTAAA ACGCTTTAAT CAAAGCAATC TTCCTAATCA TGATGATGTT TTTGGAATTT TGTTGCAATT ACCCGGTAAA AATGGGGAAT TATTTGATCC CACATTTTTA ATATCCCAAG CACATAGATC AGAAATTATT GTGACGGGAT GTATTGATCC ACTGGCACAA GTTTTAATTA AACCAATCTC TGAATTTGGT GTGGATGTTG CAGTGGGCAG TATGCAAAGA TTTGGAGTTC CATTGGGTTT TGGTGGACCC CACGCTGCAT TTTTTGCGTG TAGCGAAAAA TATAAAAGGC TTATCCCTGG AAGAATTGTT GGTCAAACTC TCTCTAAAAA TGGAGAAAAA TCTTTAAGAC TTGCATTACA AACAAGAGAG CAACATATTA GAAGGGAGAA GGCTACTAGT AATATTTGTA CTGCTCAATC TTTGTTAGCC ATAATTTCTT CTTTTTATGC TATTTATCAT GGACCTACCG GTTTAACGCA AATTGCTAAG AGATTAGTGC AGTTGAGAAT AAATTTAGAA TCATGTTTGG CTGATTTGGG TTTTGATATT CCCGATGGGA TTAGATTTGA TAGTGTTGAT GTTTATTCTG AGCATTCCCA AAAAATTCAT AATGAAGCTT TAAACAATGG TTACAACCTA AGAATTTTGC CTTTGGGATC AACTATTGAA AACTCAACTG GCTTTGGGAT CTCTTTAGAT GAGATGAGTA ATGAAAAAGA AATCGAAGAT ATTTTAACTT TCATAGCAAA TGTTATAGAA AAAAAAGAAG ATTTAGACAA TATAAAATTT GATCAGGGAT TTCAGCTTGA AAGTCTAGCT TTGAGGTCTA CTGAATGGAT GCAGCAAGAT ATATTCACAA CTTACCAAAG TGAAACTGAA TTAATGAGAT ATATATTCCG TCTTGCTGAA AAAGATTTTT CTTTAGTTGA TGGAATGATG CCATTAGGAA GCTGTACCAT GAAGTTAAAT TCTGCAGCGG AGTTAAATCC AGTCTCTTGG GCTAATTTAT CTTCAATTCA TCCTTTTTCT CCACCAAACC AAACTAAGGG CTATTCAAAA ATAATATCTG ACCTTGAAAA ATGGATAAGT GATATTGTTG GTTTAAAATC AGTTTCTTTT CAACCAAATG CAGGCTCTCA AGGAGAGTTT GCAGGCTTAT TGGCAATAAA TTCTTATTTT GTATCAAAAG GGGAACTTTC AAGAAAAAAA TGTTTAATTC CTAAAAGTGC TCATGGAACA AATCCTGCTA GTGCAGTTAT GGCAGGTTTT GATGTTTTAA CTGTTGAATG TGATGAAGAA GGAAATATTG ATTTTCAAGA TTTGTCGATT AAGGTGACGA AATTTGATAC TCAAATTGGC GCTCTGATGT TGACTTACCC TTCTACTCAT GGAGTTTTTG AATTACAAAT CAGAAAGATT TGTGACTTAA TTCACTCTAT TGGGGGATTT GTTTATTTAG ATGGAGCAAA TCTTAATGCT CAGGTTGGAT TATGCAAACC GGGGAACTAT GGAGTTGACA TTTGTCATTT GAATTTACAT AAGACATTCT GTATTCCACA TGGAGGAGGA GGTCCAGGAG TGGGTCCAGT TGCTGCATCA GAAACTTTAA GCCCATTTCT TCCTACTCAT TCTTTAAAGG ATAATAATTT ATCCAACAGT TCAAATTACG TATCTTCTGC CAAGCACGGG AGTGCAAGTA TTCTTCCAAT CAGTTGGATG TACATAAAAA TGGCTGGTCT TTGTGGTTTA AGGAAAGCAA CTTCGCATGC AATTTTATCG GCTAATTATA TTGCGCATAC TTTAAAGCAT AAATTCAAGA TTCTCTATAA AGGAAAAAAT AATTTTGTAG CACATGAATG TATTTTAGAT TTTAGAGATT TAAAATCAAA AACTGGTTTG AGTGTAAATG ATTTAGCTAA ACGATTAATA GATTATAGTT TTCATGCCCC AACAATTAGT TGGCCTGTTC CAGAGACCAT AATGATAGAG CCTACTGAAA GTGAGAGTTT GGCAGAATTG GATAGATTTT GTGAGGCTAT GCTATTGATC GGGGAAGAAA TCAGTGAAAT AGAAAATAAT ATTGAATTAA ATAATAATAA TGTAATAAGT AATGCTCCTC ATACTCTTAA AGAGTTGATT GCTGATACTT GGAATTATCC TTATTCGAAG GAAAAAGCTT CTTTTCCTTA TGGCACTCAA ACAGCTATCA AGTTTTGGTC TGCAGTTTCT AGGATTAATA ATGCATATGG TGATCGCAAT TTAATTTGTT CTTGCAATGT CAATCAAGAA GAGACTTTAG ACGAAAAAAA ATGTGCTTAA
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Protein sequence | MKSTVNSDLF INRHLGLSDV DEQKMLSKIG FNNIDQFINQ VIPEDIQLND KSSEILPQGC SEIEALNELE EIANKNTKMR SLIGLGYYDN HMPKVIQKHV LENPRWYTSY TPYQAEIAQG RLEALFNFQT IVCELTGFPI ANASLLDEGT AAAEAMAMSF AARKNKSSKL YLVESNVFDH TFNVLQTRAK PLGISLKRFN QSNLPNHDDV FGILLQLPGK NGELFDPTFL ISQAHRSEII VTGCIDPLAQ VLIKPISEFG VDVAVGSMQR FGVPLGFGGP HAAFFACSEK YKRLIPGRIV GQTLSKNGEK SLRLALQTRE QHIRREKATS NICTAQSLLA IISSFYAIYH GPTGLTQIAK RLVQLRINLE SCLADLGFDI PDGIRFDSVD VYSEHSQKIH NEALNNGYNL RILPLGSTIE NSTGFGISLD EMSNEKEIED ILTFIANVIE KKEDLDNIKF DQGFQLESLA LRSTEWMQQD IFTTYQSETE LMRYIFRLAE KDFSLVDGMM PLGSCTMKLN SAAELNPVSW ANLSSIHPFS PPNQTKGYSK IISDLEKWIS DIVGLKSVSF QPNAGSQGEF AGLLAINSYF VSKGELSRKK CLIPKSAHGT NPASAVMAGF DVLTVECDEE GNIDFQDLSI KVTKFDTQIG ALMLTYPSTH GVFELQIRKI CDLIHSIGGF VYLDGANLNA QVGLCKPGNY GVDICHLNLH KTFCIPHGGG GPGVGPVAAS ETLSPFLPTH SLKDNNLSNS SNYVSSAKHG SASILPISWM YIKMAGLCGL RKATSHAILS ANYIAHTLKH KFKILYKGKN NFVAHECILD FRDLKSKTGL SVNDLAKRLI DYSFHAPTIS WPVPETIMIE PTESESLAEL DRFCEAMLLI GEEISEIENN IELNNNNVIS NAPHTLKELI ADTWNYPYSK EKASFPYGTQ TAIKFWSAVS RINNAYGDRN LICSCNVNQE ETLDEKKCA
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