Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1728 |
Symbol | miaA |
ID | 3766553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 1614761 |
End bp | 1615660 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637798272 |
Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
Protein accession | YP_398225 |
Protein GI | 78780113 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTCTT ATCCCCCTCA TGTAATAGTT CTAATTGGAG CCACAGCAAG TGGGAAAACA GAATTAGCTA TCGAAATTGC AGAATATTTT AAAACTCGTA TACATAATAT CGATTCGAGA CAAATTTATA AATCTATGGA TATTGGAACA GCCAAACCAT CTGAGAATCA ACAAAAAAAA ATAAAGCATT TTCTAATAGA TATAGAAGAA CCTATTAATC CAATTAATGT AAAACAATTT CAAGAAATTG CTCAAAAATC AATACAAAAA GAAATTAAGC AAAATAATTT ACCTCTACTT GTTGGAGGAA GTGGTTTGTA TATGAACGCA ATAACCAAAG GTTTTTTTGT GCCGGATGTC CCTCCGCAAA ATAATTTGAG AGAGCAATTG GAGGAACTTG GTCAAAAAGA ATGTTGGGAG CTTTTAAAAA ATTGTGATCC AATTTCGGCA AAAAAAATCA ATCTTGCTGA TCAAATTAGA ACAATAAGAG CTTTGGAAGT ATTTTATGTA ACCGGTAAAC CTTTATCTTC TCAAAAAGTT CAAAAACCGC CTCAATGGAA AATACTAGAG CTTGGATTAA ATAGAGATAA TTTAAAAGAA AGAATTTCAC GAAGAACAAA AAATATGTTT TTATCTGGAA TTATTGAAGA GACGAAAAAT CTTATTTCTC GATATGGATC TGATTTACCA ATATTAGAAA CTATTGGTTA CCGTGAAGCT AAAGATGTTT TAAATAATAA TTTACCGATT GATAAGGCGA TTGAGTTAAC TAATATAAAA ACGAACCAAT TTGCCAAAAG GCAGAAAACA TGGTTTCGTA ATAAAAATAA TCCTATTTGG CTTAATAACA AAAACCTGCT AAAAGATGCA ATAATTAAGA TAGAGTCTTT TTTAGACTAA
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Protein sequence | MSSYPPHVIV LIGATASGKT ELAIEIAEYF KTRIHNIDSR QIYKSMDIGT AKPSENQQKK IKHFLIDIEE PINPINVKQF QEIAQKSIQK EIKQNNLPLL VGGSGLYMNA ITKGFFVPDV PPQNNLREQL EELGQKECWE LLKNCDPISA KKINLADQIR TIRALEVFYV TGKPLSSQKV QKPPQWKILE LGLNRDNLKE RISRRTKNMF LSGIIEETKN LISRYGSDLP ILETIGYREA KDVLNNNLPI DKAIELTNIK TNQFAKRQKT WFRNKNNPIW LNNKNLLKDA IIKIESFLD
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