Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1638 |
Symbol | rplE |
ID | 3766458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 1532597 |
End bp | 1533136 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637798178 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_398135 |
Protein GI | 78780023 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCTAA AAAATCGCTA CAAAGAATCA ATTAGGCCAA AACTTTTAAA GGATCTTGGT CTTAAAAATA TTCATCAAGT ACCTAAAGTT GTCAAAGTCA ACGTAAACAG AGGCCTTGGT GAGGCAGCTT CAAATTCAAA ATCTCTAGAA GCCTCTTTAA ACGAAATGGC AACAATTACA GGACAAAAGG CCTTAGTAAC TAGGGCTAAA AAAGCCATCG CGGGTTTTAA AATTCGTGAA GGTATGCCCA TTGGTTGTAC TGTAACTTTG AGAGGAGACA GGATGTATTC TTTTTTGGAG AGATTTATAA ATCTTGCGTT ACCAAGAATC AGAGACTTTA GAGGAGTCAA TCCAAAAAGT TTTGATGGGA GAGGTAATTA CACCGTTGGA GTGAAAGAGC AATTGATTTT TCCTGAAATC TCTTTTGATA AAATAGATTC AATAAGAGGT ATGGATATAA CTATTGTCAC TAGTGCAAGA TCAGATCAGG AAGGTAAAGC TCTTTTGCAA GAGTTAGGAA TGCCTTTTAG TAAGAATTAA
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Protein sequence | MTLKNRYKES IRPKLLKDLG LKNIHQVPKV VKVNVNRGLG EAASNSKSLE ASLNEMATIT GQKALVTRAK KAIAGFKIRE GMPIGCTVTL RGDRMYSFLE RFINLALPRI RDFRGVNPKS FDGRGNYTVG VKEQLIFPEI SFDKIDSIRG MDITIVTSAR SDQEGKALLQ ELGMPFSKN
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