Gene PMT9312_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1620 
Symbolalr 
ID3766439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1520887 
End bp1522086 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content31% 
IMG OID637798159 
Productalanine racemase 
Protein accessionYP_398116 
Protein GI78780004 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATTC GGCAAAAAAA TCATGGATTT AATTCTGACA AATATCCAAC TTTTGAAAAA 
GATATAGATC CAAAACAAAG AGCATGGATT GAAGTTAAAG GTAAAGCAAT AGAGTCAAAT
GTAAGGCAGT TAAGATCAAA ATTAAGTAAA AGTTGTCAAT TTATGGCAGT TGTTAAAGCA
GATGGATATG GACATGATGC AAAAGTAGTA TCTGAATATG CTATTAAAGG TGGAGCTTCG
CAATTAGGAG TTGCCACTTT AAAAGAAGGG ATTATGCTTC GTTCTTCTGG AGTTAAAAAA
CCAATTCTTA TTCTGGGAAA TCTATATGCC AAAAGGGATT TAATAATATC TTTTAAAAAT
GATCTTATGC CAACTATTAG TAGTATAAGA GAGTGTTTAA TTTGCAATAA TATTGGGAAG
CACTTTGGGT CGAAATTTTC TTTACATCTT AAAGTTGATA CTGGAATGTC AAGATTAGGG
TTTGAATCTA ATAAATTTGT TCAGCAATTT GAAAAAATAA AATCTTTTGA AAACATTTCA
GTAGAAGGAA TATATAGTCA TTTATCATCT GCAGATGAAG ATAACTCATT AGATCCCAAA
AGTAGTACAC AAATACAAAG ACTAAAGTTT CAGGAATTAT TACAGCAAAT TAACGTTGAT
AGAAATCACA ATATCAAGAT TCATTTGGCA AATTCTGCGG GCATGCTTAT TAATAAAGAC
TTTCATTTTC ATATGGTACG TGTTGGGCTT TCTATGTATG GATATAGTCC TCTCGCAAAA
ATAGATAGAA ATTTATCTCT TAAACCAGCT TTATTTTTGA AGGTCAAAGT AGCTTTTATA
AGAATTATTG ATCAAGGGGT AAAAGTAAGT TACGGAGGAA AATTTGTAAG TGGTAGAAAA
ACTAAGTTAG CTGTATTAAG CATTGGTTAT GCAGATGGAG TCCCAAGAAA TCTTTCAGGC
AAGATAAACG TTATTCATAA TAATGAACTT TATCCCCAAG TTGGATCTAT AACTATGGAT
CAAATGATGG TGGACATAAC AGGTTCAGAT GAAATTAAAA TTGGTAGTAC TATGTTATTA
CTAGGATCTG ACGGAGACAA AACAATTTCT CCTTTTGATT GGGCAAATCA ATCTAACACT
ATTCCATGGG AAATTCTTTG TTCCTTTAAA AATAGATTGC CGAGAGTTCA AGTTGATTAG
 
Protein sequence
MQIRQKNHGF NSDKYPTFEK DIDPKQRAWI EVKGKAIESN VRQLRSKLSK SCQFMAVVKA 
DGYGHDAKVV SEYAIKGGAS QLGVATLKEG IMLRSSGVKK PILILGNLYA KRDLIISFKN
DLMPTISSIR ECLICNNIGK HFGSKFSLHL KVDTGMSRLG FESNKFVQQF EKIKSFENIS
VEGIYSHLSS ADEDNSLDPK SSTQIQRLKF QELLQQINVD RNHNIKIHLA NSAGMLINKD
FHFHMVRVGL SMYGYSPLAK IDRNLSLKPA LFLKVKVAFI RIIDQGVKVS YGGKFVSGRK
TKLAVLSIGY ADGVPRNLSG KINVIHNNEL YPQVGSITMD QMMVDITGSD EIKIGSTMLL
LGSDGDKTIS PFDWANQSNT IPWEILCSFK NRLPRVQVD