Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1620 |
Symbol | alr |
ID | 3766439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 1520887 |
End bp | 1522086 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637798159 |
Product | alanine racemase |
Protein accession | YP_398116 |
Protein GI | 78780004 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATTC GGCAAAAAAA TCATGGATTT AATTCTGACA AATATCCAAC TTTTGAAAAA GATATAGATC CAAAACAAAG AGCATGGATT GAAGTTAAAG GTAAAGCAAT AGAGTCAAAT GTAAGGCAGT TAAGATCAAA ATTAAGTAAA AGTTGTCAAT TTATGGCAGT TGTTAAAGCA GATGGATATG GACATGATGC AAAAGTAGTA TCTGAATATG CTATTAAAGG TGGAGCTTCG CAATTAGGAG TTGCCACTTT AAAAGAAGGG ATTATGCTTC GTTCTTCTGG AGTTAAAAAA CCAATTCTTA TTCTGGGAAA TCTATATGCC AAAAGGGATT TAATAATATC TTTTAAAAAT GATCTTATGC CAACTATTAG TAGTATAAGA GAGTGTTTAA TTTGCAATAA TATTGGGAAG CACTTTGGGT CGAAATTTTC TTTACATCTT AAAGTTGATA CTGGAATGTC AAGATTAGGG TTTGAATCTA ATAAATTTGT TCAGCAATTT GAAAAAATAA AATCTTTTGA AAACATTTCA GTAGAAGGAA TATATAGTCA TTTATCATCT GCAGATGAAG ATAACTCATT AGATCCCAAA AGTAGTACAC AAATACAAAG ACTAAAGTTT CAGGAATTAT TACAGCAAAT TAACGTTGAT AGAAATCACA ATATCAAGAT TCATTTGGCA AATTCTGCGG GCATGCTTAT TAATAAAGAC TTTCATTTTC ATATGGTACG TGTTGGGCTT TCTATGTATG GATATAGTCC TCTCGCAAAA ATAGATAGAA ATTTATCTCT TAAACCAGCT TTATTTTTGA AGGTCAAAGT AGCTTTTATA AGAATTATTG ATCAAGGGGT AAAAGTAAGT TACGGAGGAA AATTTGTAAG TGGTAGAAAA ACTAAGTTAG CTGTATTAAG CATTGGTTAT GCAGATGGAG TCCCAAGAAA TCTTTCAGGC AAGATAAACG TTATTCATAA TAATGAACTT TATCCCCAAG TTGGATCTAT AACTATGGAT CAAATGATGG TGGACATAAC AGGTTCAGAT GAAATTAAAA TTGGTAGTAC TATGTTATTA CTAGGATCTG ACGGAGACAA AACAATTTCT CCTTTTGATT GGGCAAATCA ATCTAACACT ATTCCATGGG AAATTCTTTG TTCCTTTAAA AATAGATTGC CGAGAGTTCA AGTTGATTAG
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Protein sequence | MQIRQKNHGF NSDKYPTFEK DIDPKQRAWI EVKGKAIESN VRQLRSKLSK SCQFMAVVKA DGYGHDAKVV SEYAIKGGAS QLGVATLKEG IMLRSSGVKK PILILGNLYA KRDLIISFKN DLMPTISSIR ECLICNNIGK HFGSKFSLHL KVDTGMSRLG FESNKFVQQF EKIKSFENIS VEGIYSHLSS ADEDNSLDPK SSTQIQRLKF QELLQQINVD RNHNIKIHLA NSAGMLINKD FHFHMVRVGL SMYGYSPLAK IDRNLSLKPA LFLKVKVAFI RIIDQGVKVS YGGKFVSGRK TKLAVLSIGY ADGVPRNLSG KINVIHNNEL YPQVGSITMD QMMVDITGSD EIKIGSTMLL LGSDGDKTIS PFDWANQSNT IPWEILCSFK NRLPRVQVD
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