Gene PMT9312_1499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1499 
Symbol 
ID3766316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1407588 
End bp1407890 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content32% 
IMG OID637798036 
ProductRNA-binding region RNP-1 
Protein accessionYP_397995 
Protein GI78779883 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.212691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATTT TTATTGGAAA TCTATCTTGG GAAACTGAAG TTGAAGATCT TGAACAACTT 
TTTAGTAATT ATGGGGTGGT AAAGAAATGT TATTTACCTC TTGATAGAGA AACAGGTAGA
AAAAGAGGTT TTGCTTTTTT AGATTTAAAT AACCAAAATT CCGAAAAAAA AGCTATAGAT
GACCTTCAAG ATGTTGAATG GATGGGGAGA GAGATAAGGG TGAACGAGGC TGAGAAAAGA
AAAGGGCCCA ATAATAAAAA ACGCAATAAG TCTTATAGCA ATAATAGGAA CTTGAATGCA
TAA
 
Protein sequence
MTIFIGNLSW ETEVEDLEQL FSNYGVVKKC YLPLDRETGR KRGFAFLDLN NQNSEKKAID 
DLQDVEWMGR EIRVNEAEKR KGPNNKKRNK SYSNNRNLNA