Gene PMT9312_1442 details

Gene Information

• Locus tag: PMT9312_1442
• Symbol: rplU
• ID: 3766258
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: +
• Start bp: 1356183
• End bp: 1356623
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 637797978
• Product: 50S ribosomal protein L21
• Protein accession: YP_397938
• Protein GI: 78779826
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0261] Ribosomal protein L21
• TIGRFAM ID: [TIGR00061] ribosomal protein L21

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAATT CTAAAAACTC TTCAAACAAT TCTACTAATG GTAATGAGTT GTACGCAATA 
GCAGAAACTT CTGGTCAACA ATTTTGGTTC GAAGTTAATA GATACTATGA CATAGACAGG 
TTAAATGCAA AAGAGAAAGA TAAGATAACA CTTGAAAAAA TCTTACTTTT AAAAGATAAA 
AACTCGATTA CCATTGGTAA ACCTTATGTC AAAGATGCAA AAATTGAATT AGAAGTAGTT 
TCTCACAAAA GAGATAAGAA AATTCTTGTA TACAAGATGC GTCCGAAAAA AAAGACAAGA 
AGAAAGATGG GTCACAGACA AGAACTTACA AGAGTTATGG TAAAATCAAT CTCATTAGGT 
AAAAGTGCTC CTAAGTCTTC TGCAAAAAAG GAAACTGTTA AAAAGGAAAC TAAACCAAAA 
TCTGAAAAAT CTACAAATTA A 

 

Protein sequence

MTNSKNSSNN STNGNELYAI AETSGQQFWF EVNRYYDIDR LNAKEKDKIT LEKILLLKDK 
NSITIGKPYV KDAKIELEVV SHKRDKKILV YKMRPKKKTR RKMGHRQELT RVMVKSISLG 
KSAPKSSAKK ETVKKETKPK SEKSTN