Gene PMT9312_1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1297 
Symbol 
ID3766106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1203744 
End bp1205078 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content25% 
IMG OID637797827 
Producthypothetical protein 
Protein accessionYP_397792 
Protein GI78779680 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3307] Lipid A core - O-antigen ligase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.289978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAAAAG ATTTTGACTA TAGAAATAAA ATGTTAACTA ATAATTTTCT TAAATATGCA 
AAAAAAAATT ATCTGAATAT TGGTAAATAT TCTTTTCTTA TAGGAGTATT CCTTTTACCC
ACTGCATTCG TAATATCTGC GTTATTTTTA CTATTTTCTT TAGTTTTATC TTTTTCCAAA
AGTAAACTTT GTTTTTTAAA AGATAAATTG AATTTATTAG TAATCATTGC GATAGGAATG
ATCCTATTTA GTTCACTTAT AAATAATACA ATTTTAATTC CTAGGGTGCT TCCAAATTTA
GATAATTCAT TTGTATTGCT AAATTTATTC AATTGGATTC CTCCTTTATT AGGCTTTATT
GGATTCCAAA GCTATGTAAA AACTGAAGAT GATAGATTAA TTTTTTCTAA ATATTTATTA
TCTGGAACAG TTCCATTTAT AGTAAGTTGT CTTTTTCAAC TATTCTTTGA CTTACATGGA
CCTTTTCAAA TTTTTAATGG TTTAATTATA TGGTTTCAAA AGCCTCTCGA AGTTACTGGA
GGGGTTTCAG GATTATTTAG TAATAGAAAT TATGCAGGTA TTTGGCTTTC AATAAATCTT
CCATTTGGAA TATACCTCAT AAAGAAAAAT ATAAAATATA AAATTAAAAG TCTTTCCATT
CTATTCATCA CTTTTCTGAT TAGCTATTTA ATAATCAATA CAAATTCTAA AAATGCTCTG
CTCAGTATGA TTTCAACCAT AATAGTTTTC TTTGGAATAA AGACTTTTTT TATATTTTCA
ATTGGTATAA TTTTCTTTTT TGTCATTCTT AACTTACTGC CAACACTAAA TATATTAGAG
TTCATACCTG AAACATTTTT AAGAATTAAA AGATTCACAT TCTTCATTAA TACACCAAGA
TTAGTAATTT TCAGATCAGC TTTGAATTTT ATATTTCAAA GACCTTTTTT AGGTTGGGGA
TCAGGAACAT TCGCTTTAAT TTATCTAGCA AAAGACAATA TGTGGAATCC ACCTTTTGTA
TTTCATAAAT TTCAACATAC TCATAATTTA TTTTTGGAGA TGGCTTTTAA TTTTGGCATC
CCAATTTCAA TATTATTAAC TTCAATAGCT TTTTATATTT TTTATAAATC TCTTAAAGTG
TTTTACTCTA ATGATAAAAA AGATGATTAT CAAAATCTAA ATAAAGCATG GATTTCAGCA
GGTATAGTTA TTTTCTTAAT CCATTTAAGT GATATGACTT TTTATGATGG TAGAGTCAGT
ATGTTGATTT GCATCTTATT CTCTGGCTTA AGGTGTATTT CATTAACAAA AAATAATCTG
AAAATTTGTA ATTAA
 
Protein sequence
MLKDFDYRNK MLTNNFLKYA KKNYLNIGKY SFLIGVFLLP TAFVISALFL LFSLVLSFSK 
SKLCFLKDKL NLLVIIAIGM ILFSSLINNT ILIPRVLPNL DNSFVLLNLF NWIPPLLGFI
GFQSYVKTED DRLIFSKYLL SGTVPFIVSC LFQLFFDLHG PFQIFNGLII WFQKPLEVTG
GVSGLFSNRN YAGIWLSINL PFGIYLIKKN IKYKIKSLSI LFITFLISYL IINTNSKNAL
LSMISTIIVF FGIKTFFIFS IGIIFFFVIL NLLPTLNILE FIPETFLRIK RFTFFINTPR
LVIFRSALNF IFQRPFLGWG SGTFALIYLA KDNMWNPPFV FHKFQHTHNL FLEMAFNFGI
PISILLTSIA FYIFYKSLKV FYSNDKKDDY QNLNKAWISA GIVIFLIHLS DMTFYDGRVS
MLICILFSGL RCISLTKNNL KICN