Gene PMT9312_1271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1271 
Symbol 
ID3766079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand- 
Start bp1181364 
End bp1182422 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content38% 
IMG OID637797800 
Productchlorophyll a/b binding light harvesting protein PcbD 
Protein accessionYP_397766 
Protein GI78779654 
COG category 
COG ID 
TIGRFAM ID[TIGR03041] chlorophyll a/b binding light-harvesting protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0702178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTACAAA CTTACGGAAA ATCTGATGTC ACCTATGACT GGTACGCAGG AAATTCTGGT 
GTTGTTGGCC GTTCAGGTAA ATTCATAGCT TCTCACGCTG CTCATGCAGG ACTTATGATG 
TTTTGGGCAG GTGCTTTTGG ATTATTTGAA TTAGCTCGTT ACGATGCCAG TATTCCAATG 
GGTGCTCAAA AATTAATTTG TTTACCTCAC CTCGCAGGTC TTGGGATAGG TGGTATTGAA 
AATGGAGTTA TTACTGAAAC ATATGGAATT GTTGTAATTT GCACATTGCA TCTAATTTTT 
TCTGCTGTAT TGGGTGCTGG AGGATTATTA CATTCCACCA AATTTGCCGG GGATCTTGCA 
GATTATTCTG AAACCAGTAA GCCAAGAAAA TTCGATTTTG AATGGGATGA TCCAGATAAA 
TTAACTTTCA TTCTTGGCCA TCATCTAATC TTCTTAGGTA TAGGAGCTAT TTGGTTCGTG 
GAATGGGCTA AATGGCATGG GATCTATGAC CCTGCAATTG GTTCAACAAG ACAAGTAATT 
TACAACTTGG ATATTGCTGC TATTTGGAAT CATCAATTTG ATTTTTTAAA AATAGATAGT 
CTAGAAGATG TTCTGGGAGG TCATGCATTT CTAGCCTTTT TAGAAATAAT TGGCGGAATT 
TTCCACATTT TTACTAAGCA ATTTGGAGAA TATACAGAAT TTAAAGGTAA AGGGTTACTA 
GGTGCTGAAG CTATTTTGTC TTACTCAGTA GTAGGCGTTT CCTATATGGC CTTTGTCGCG 
GCATTCTGGT GTGCTTCAAA CACAACAATA TACCCAGTTG ATTTATATGG AGAGCCATTA 
AAGCTTCAAT TTGAGTTCGC TCCTTATTTT ACGGACACAG TTGACTTAGG TTCTGGCGTA 
TATAGTGCAA GAGCTTGGCT TGCAAATGCT CATTTCTATT TGGGATTCTT TTTCTTGCAA 
GGTCATTTAT GGCATGCTCT AAGAGCTATG GGGTTTGACT TTAAGAAAAT TGGTCAAGCT 
TTTGACAATA TGGAAAACGC AAAAATTACA CAAAAATAG
 
Protein sequence
MLQTYGKSDV TYDWYAGNSG VVGRSGKFIA SHAAHAGLMM FWAGAFGLFE LARYDASIPM 
GAQKLICLPH LAGLGIGGIE NGVITETYGI VVICTLHLIF SAVLGAGGLL HSTKFAGDLA 
DYSETSKPRK FDFEWDDPDK LTFILGHHLI FLGIGAIWFV EWAKWHGIYD PAIGSTRQVI 
YNLDIAAIWN HQFDFLKIDS LEDVLGGHAF LAFLEIIGGI FHIFTKQFGE YTEFKGKGLL 
GAEAILSYSV VGVSYMAFVA AFWCASNTTI YPVDLYGEPL KLQFEFAPYF TDTVDLGSGV 
YSARAWLANA HFYLGFFFLQ GHLWHALRAM GFDFKKIGQA FDNMENAKIT QK