Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1238 |
Symbol | |
ID | 3766045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 1153915 |
End bp | 1155141 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637797766 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_397733 |
Protein GI | 78779621 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.191618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAATACA TTACTGTTCT CGGTTCTACT GGTTCAATAG GGACTCAGAC TCTCGAAATA GCTAGTGAGC AGCCTGATAA GTTTAAAGCC GTAGCTCTTT CGGCAGGACG AAATATTACT TTATTAACTG AACAAGTTAA AACACATAAA CCAGAAGTAG TTGCAATTGA GGATGAAAAT CTTATAGAAG ATTTAAAAGA TAATATTAAT AACTTAGATT TGGATAGTGC TCCCTTGGTT TTGGGTGGAA AGGAGGGGAT TAACGCAGTT GCAGCTTGGG ATAAGGCAGA TACAGTTATA ACCGGGATAG TAGGATGTGC AGGCTTAATT CCAACAATGT CAGCAATTAA TGCGGGGAAA AATATTGCCC TTGCTAACAA AGAAACTTTA ATTGCAGCAG GGCCAATTGT TATTCCTGCA TTAAAGAAAA ATAATAGTAG GCTTTTACCT GCTGATTCAG AACACTCTGC TATCTTTCAA TGCTTACAAG GATTACCTAA TTATGAAAAT GCAGATTTTT CAACAGGAGT GATGCCTAAG GGTTTAAAAG CCATACATTT AACAGCTTCT GGTGGTGCTT TCAGAGATTG GCCCGTTGAG AATTTAAAGC ATGTCACAGT GGAAGATGCG ACTTCACATC CTAATTGGGA TATGGGAAAA AAAATAACTG TAGATTCTGC AACTCTTATG AATAAAGGAT TAGAAGTTAT AGAAGCTCAT TATTTATTTG GGACCTCTTA CGAAAATATC GAAATAGTTA TTCACCCTCA AAGTATTATT CATTCAATGA TTGAGATGGA AGATTCTTCA GTATTAGCTC AATTAGGTTG GCCAGATATG AAGCTACCTA TTTTATATGC GATGAGTTGG CCTGAAAGGT TTAAAACAAA TTGGAAAAGA TTAAACCTAA GTGAAATTGG AAAATTAACT TTTAAAGAGC CAGACGAGTT TAAATATCCA TGCATGGGAC TTGCTTATGC CGCAGGAAAA TCTTCAGGGA CTATGCCTGC AGTCTTAAAT GCTGCTAACG AAATGGCTGT TGAACAATTC CTTAAAGAAA AAATTTCTTT TCAAGAAATT CCAACATTTA TAAGTAAAGC TTGTGAATCA CATATGGAGA ATTTGAATTT GAGTCCCGAA TTGGAGGATA TTCTTGAAGT GGATAATTGG GCCAGAATTT TCGTTAAGCA AGAAATAAAA AAAGGGAAAA AATACGTAAG TATTTGA
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Protein sequence | MKYITVLGST GSIGTQTLEI ASEQPDKFKA VALSAGRNIT LLTEQVKTHK PEVVAIEDEN LIEDLKDNIN NLDLDSAPLV LGGKEGINAV AAWDKADTVI TGIVGCAGLI PTMSAINAGK NIALANKETL IAAGPIVIPA LKKNNSRLLP ADSEHSAIFQ CLQGLPNYEN ADFSTGVMPK GLKAIHLTAS GGAFRDWPVE NLKHVTVEDA TSHPNWDMGK KITVDSATLM NKGLEVIEAH YLFGTSYENI EIVIHPQSII HSMIEMEDSS VLAQLGWPDM KLPILYAMSW PERFKTNWKR LNLSEIGKLT FKEPDEFKYP CMGLAYAAGK SSGTMPAVLN AANEMAVEQF LKEKISFQEI PTFISKACES HMENLNLSPE LEDILEVDNW ARIFVKQEIK KGKKYVSI
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