| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1236 |
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| Symbol | |
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| ID | 3766043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | + |
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| Start bp | 1149408 |
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| End bp | 1152338 |
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| Gene Length | 2931 bp |
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| Protein Length | 976 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637797764 |
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| Product | DNA polymerase I |
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| Protein accession | YP_397731 |
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| Protein GI | 78779619 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.206272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTAA AATCAGAAAA CTCTAAAAAA CCAATTTTAC TTTTAGTCGA TGGTCACTCA
CTTGCTTTTA GAAGCTTCTA TGCATTTAGC AAAGGGATTG ATGGAGGTTT AACTACCAAA
GAGGGTTTCC CAACAAGTGT CACATATGGA TTTCTAAAAA GCCTTCTGGA TAATTGCAAA
AATATAAGTC CTGAGGGTGT TTGTATTACT TTTGACACAG AAAAACCTAC TTTCAGGCAT
GAATTAGATC CAAATTATAA GGCAAATAGA GATGTAGCAC CTGATGTTTT TTTTCAGGAT
ATTGAACAAC TAGAAATCAT TTTAGAAGAA AGTCTTAATT TACCAATTTT CAAATCTCCA
GGTTACGAAG CAGATGATCT CCTAGGCACA ATTGCAAATG ACGCTTCTTC TAAAGGATGG
TGCGTGAATA TTCTTTCTGG AGATAGGGAT TTATTTCAAT TAGTTGATGA TCAAAAAGGT
ATTTATGTCC TTTATATGGG TGGTGGTCCA TATGCAAAAA GTGGTAATCC AACCCTAATT
AATGAAAATG GAGTAAAAGA AAAATTAGGT GTAGTTCCAG AAAGAGTGGT TGATCTTAAA
GCTCTAACTG GTGATAGTTC TGATAATATT CCTGGAATTA AAGGTGTAGG TCCAAAAACC
GCAATTAATC TACTAAAAGA AAACGATACA CTTGATGGAA TCTATCAGGC TTTGGACAAA
ATTCTGCAGA ACAATGATAA AAAATATAAA GGATTCATCA AAGGTTCAGT TATAGAAAAG
CTCAAAAATG ATAAATATAA TGCTTATCTT TCTAGAGATT TAGCAAAAAT TAATACTGAA
GTACCTTTGA TATTAAGTGA TGGTTATGAA CTAAAAAATA TAAATCAAGA ACTTCTTTCA
GAGTCACTGC AAAAACTAGA ATTATCAACA CTACTTCGGC AAATTGATAT TTTCAATTCA
ACTTTTAGTA AAGGTGGTTT TGACAAAAAT AATGTAGCTA AAGTGGACGA GAAGGCACCA
AAAGTCTCTA GTAAAAATGA ATTGGACAAT CGTGAGAATA AAATCCCTAA AATCAGCGTA
ACTATTGTAA ATAATTTTGA ATTACTTGAT AAATTAATTC AAAGATTAGA AAAGACTAAT
GAGATAGTTT CTTTAGATAC AGAGACTAAT AGTTTAAATC CAATCGATGC CGAACTTGTT
GGGATAGGAT TATGTCTTGG AGAAGAAACT GATGATTTAT TTTATATACC TCTTGGTCAT
CAAACAAAAA AAGAAACTAC CAATCAATTA TCAATCGAAG AAGTTTTTTC AAAAATAAGA
ACTTGGATTG AAGATCCAAA AAAAGAAAAG GCACTCCAAA ATTCTAAATT TGACAGGCAA
ATATTTTTTA ATCACGGACT TGATCTTAAA GGAGTAACCT TTGACACCTT GTTAGCAGAC
TATCTTCTAA ATAATCAGGA AAAGCACGGG TTAAGTGAAA TTAGTTTTAG ATTATTTGGA
TTTAAGCCCC CTTCATTTAA GGAAACAGTT GGAAAAAATA AAGACTTTTC ATTTGTTGAT
ATTGATGAAG CAAGTGTTTA CTGCGGTTAT GATGTATTCC TAACTTTTAA AATCGTCAAA
ATTTTTAAAG AAAGATTCTC AATGGAAAAA GATGAATTAA TCAAACTTTT CGAAGAAATT
GAGCTACCTT TAGAGCCGGT ATTATCCCAA ATGGAAATGA ATGGCATCAC TATAGACATC
CCTTATTTGG ATAAACTCTC AAAAGAACTA AAAAGTACCT TAGAAGATAT TGAAAGTAAA
GTTTATGAAT TAGCGGAAGG AAATTTTAAT CTATCTTCAC CAAAACAACT TGGTGAGATC
TTGTTTGAAA AATTAAATTT GGATAAAAAG AAATCAAGGA AAACAAAAAC AGGATGGAGT
ACGGATGCAG TAGTTCTAGA AAGATTAGTC GACGAACATG AAATAATTCA ATATTTAATA
AAACATAGAA CTCTTAGCAA ATTACTAAGC ACCTATATTG ATGCTCTTCC AAATCTTATT
AACGAAAAGA CAGGAAGGGT TCATACAAAC TTTAATCAAG CTGCTACAGC GACTGGGAGG
CTAAGTAGTA GCAATCCTAA TCTTCAAAAT ATCCCGGTTA GGACTGAATT TAGTAGGAGA
ATCAGAAAAG CATTCTTGCC TGAAAAAAAT TGGAAACTTT TATCAGCTGA TTATTCTCAG
ATCGAATTAA GAATACTTGC TCACTTAGCG GATGAAGAAA TATTAATTAA TGCATTTCAT
AAAAATGATG ATATTCATTC TTTGACTGCA AGATTAATTT TCGAGAAAGA AGAAATATCA
TCCGACGAAA GGAGAGTTGG AAAAACAATA AATTTTGGAG TTATCTATGG TATGGGGATC
AAAAAGTTTG CCCGTTCAAC AGGAGTAAGT ACTCCAGAGG CAAAAGAATT CCTAATAAAA
TACAAAGAAA GATATTCAAA AATTTTCAAA TTTCTTGAAC TCCAAGAAAG GCTTGCCTTA
TCAAAAGGAT ATGTAAAAAC AATTTTTGGT CGAAAGAGAG AATTTAAGTT TGATAAAAAT
GGACTTGGAA GATTAATAGG GAAAGATCCT TACGAAATTG ACTTGCAATC CGCAAGAAGG
GCTGGCATGG AAGCACAGTC ATTAAGAGCC GCAGCTAATG CACCAATTCA GGGTTCAAGT
GCAGACATTA TTAAAATTGC AATGGTTCAA ATAAATAAGA AATTCATAGA AATGAATGTT
CCAGCAAAAA TGCTTTTACA AGTACATGAT GAATTATTGT TTGAAGTTGA ACCAGATTCG
TTGGAAATTA CGACGAAATT AGTGAAGAAG ACTATGGAAG ATTGTGTAAA ATTGAATGTG
CCTCTTTTAG TTGATATTGG CATTGGAGAC AATTGGATGG AGACAAAATA A
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| Protein sequence | MSLKSENSKK PILLLVDGHS LAFRSFYAFS KGIDGGLTTK EGFPTSVTYG FLKSLLDNCK
NISPEGVCIT FDTEKPTFRH ELDPNYKANR DVAPDVFFQD IEQLEIILEE SLNLPIFKSP
GYEADDLLGT IANDASSKGW CVNILSGDRD LFQLVDDQKG IYVLYMGGGP YAKSGNPTLI
NENGVKEKLG VVPERVVDLK ALTGDSSDNI PGIKGVGPKT AINLLKENDT LDGIYQALDK
ILQNNDKKYK GFIKGSVIEK LKNDKYNAYL SRDLAKINTE VPLILSDGYE LKNINQELLS
ESLQKLELST LLRQIDIFNS TFSKGGFDKN NVAKVDEKAP KVSSKNELDN RENKIPKISV
TIVNNFELLD KLIQRLEKTN EIVSLDTETN SLNPIDAELV GIGLCLGEET DDLFYIPLGH
QTKKETTNQL SIEEVFSKIR TWIEDPKKEK ALQNSKFDRQ IFFNHGLDLK GVTFDTLLAD
YLLNNQEKHG LSEISFRLFG FKPPSFKETV GKNKDFSFVD IDEASVYCGY DVFLTFKIVK
IFKERFSMEK DELIKLFEEI ELPLEPVLSQ MEMNGITIDI PYLDKLSKEL KSTLEDIESK
VYELAEGNFN LSSPKQLGEI LFEKLNLDKK KSRKTKTGWS TDAVVLERLV DEHEIIQYLI
KHRTLSKLLS TYIDALPNLI NEKTGRVHTN FNQAATATGR LSSSNPNLQN IPVRTEFSRR
IRKAFLPEKN WKLLSADYSQ IELRILAHLA DEEILINAFH KNDDIHSLTA RLIFEKEEIS
SDERRVGKTI NFGVIYGMGI KKFARSTGVS TPEAKEFLIK YKERYSKIFK FLELQERLAL
SKGYVKTIFG RKREFKFDKN GLGRLIGKDP YEIDLQSARR AGMEAQSLRA AANAPIQGSS
ADIIKIAMVQ INKKFIEMNV PAKMLLQVHD ELLFEVEPDS LEITTKLVKK TMEDCVKLNV
PLLVDIGIGD NWMETK
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