Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1202 |
Symbol | |
ID | 3766009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 1122591 |
End bp | 1124489 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 637797730 |
Product | TPR repeat-containing protein |
Protein accession | YP_397697 |
Protein GI | 78779585 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATCTA ATAAGAATAA TATTGATAAA AGTAAAAATA AACTATTTAA AGATAATGAA TTTATATCAC AAACAAAAAG AGCGATTCAT TTCGCTAGAT TGGGCAATTT TCATGCATCA GAAAAGATTT TTAAAGAATT AATTTCTAAA TCTAAATATG ATTACTTAAC TTTACATAGA TTAGCTGGAA TATCATTAAG ACTTGGGAAG GAGAATCAGT ATCTCTATTA CTTAAAAGAA ACTATTAAAT GTAAAAAAGA CTATGGAGAA GCATATGCGG AATTAGGGAA TTATTTCACA AAAGTTGGTC AAATTAATAA TGCATTAAAT TATTTCCATA TGGCAGTTAA TTTCACTCCG GATTTATATG GGGTTTATAT AAATATTGGA AATATTTTTT CAGATTTAGG AAGAAATGAA GAAGCATTAA AAAATTATGA AAAAGCATTG AGCATCAAAA ATGACTTTCC ATCAACTTTA TACAATATCG GTAATATTCT TTTTAACAAG AAAGATTTCA ATGGTGCAGA GAAATATTTT CTTAAAGCAC TTTCCTTTGA AAAAAATCAT GTTAAATCAA AAATAGGATT AATAAGTATT TATTCAGAGA CTTTCAATAT AAAATCTCTA AGAAATTTTA AAAGTTTTAT TAAAAATGTT GGAATAAAAA ATGGTGATGA GATATGTAGG TTAATGACTT TTTTTTACTT AGATAGTTCT CCACAAAAAC AATATTTAAG AGCACAAAAT TTTTCCAAGA AAGTTTTTGG TGATATTCAA AAGATTAACA AAATGCCAAT AAAAATAAAC AAGAAAAAAA TTAGAGTTGG TTATATATCA TCAAATTTTA ATGATCATCC AGTTTTAAAA GTAATGGATT CTATTTTTAA AGGTCATGAT AAAACTAGCT TTGAAATATA TGCTTATTAC CTTTTTAAAA ATGATGATGA CAATACTAAA AAAGTAAAGA AATACTTTGA TTCCTTTAAA AATATTGCAT CATTATCCAA TAAAGAAATG ATAAAAATCA TAAGATCTGA TGAATTAGAT ATAGCAGTTG ATCTTATGGG TTATACAAAT AGAAATAAGG CGAACATTTT TAATTCAAGG ATAGCTCCTA TACAAATAAA TTATTTGGGA TTTGCAGGCA CTACATGCAT ACCAAATATG GATTTTTTGA TAGCTGATAA ATTTGTAATT CCGAAAAAAA ATATGAAATT TTATTCTGAA AAAATTATTT ATATGCCCAA CTGTTTTATT AACTCAATTA AATATCAATA TTCAAATTCA AAAGAATCAA TAAAATTGAA TTTGCCACCA AAATCAATTG TACTTGCAGC ATTTCACATG GCATTTAAAT TATCCGAAGA AGTTGTTAAC AGTTGGATAA AAGTTCTTAA TCAAACAGAA AATACTTATT TATGGTTAAA AATTTCAAAT AAACTTGCTA AAAAAAATTT AATTTCTCAC TTTCAATCTA AAAATGTTGA TTTAAAAAGA ATTTTATTTG CTGAAAAGGT TGATCTTTAT ACTGAGCATA TTTCAAGATA TTCAAAAGCA GATCTCTTTT TAGACACTTT TAACTTTAAT GGTCATTCAA CACTTGTAGA GTGTATATGG TCCGAACTTC CTTTTATTAC ACTTGCTGGA GAAAGCTTTG CTTCAAGAGT TGGAGCAAGC ATATTGCATT CTTTAGGGTT GTCAGAACTT ATCGCCAAAT CTACAGATGA ATATATTGAA AAGGTCATTT TTTATACTAA GAATTCTCAT AAGCTCGCAT TAATTAAGAA TCAAATCAGA AAACAAAAAA AAGAAGGGGA TTTTTTTAAT CAAAAACTAT TTGTTAATCA ACTGGAAGAA AAATACAAAA GTTGCATTAA AAGTTTTAAG TCAACTTAA
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Protein sequence | MESNKNNIDK SKNKLFKDNE FISQTKRAIH FARLGNFHAS EKIFKELISK SKYDYLTLHR LAGISLRLGK ENQYLYYLKE TIKCKKDYGE AYAELGNYFT KVGQINNALN YFHMAVNFTP DLYGVYINIG NIFSDLGRNE EALKNYEKAL SIKNDFPSTL YNIGNILFNK KDFNGAEKYF LKALSFEKNH VKSKIGLISI YSETFNIKSL RNFKSFIKNV GIKNGDEICR LMTFFYLDSS PQKQYLRAQN FSKKVFGDIQ KINKMPIKIN KKKIRVGYIS SNFNDHPVLK VMDSIFKGHD KTSFEIYAYY LFKNDDDNTK KVKKYFDSFK NIASLSNKEM IKIIRSDELD IAVDLMGYTN RNKANIFNSR IAPIQINYLG FAGTTCIPNM DFLIADKFVI PKKNMKFYSE KIIYMPNCFI NSIKYQYSNS KESIKLNLPP KSIVLAAFHM AFKLSEEVVN SWIKVLNQTE NTYLWLKISN KLAKKNLISH FQSKNVDLKR ILFAEKVDLY TEHISRYSKA DLFLDTFNFN GHSTLVECIW SELPFITLAG ESFASRVGAS ILHSLGLSEL IAKSTDEYIE KVIFYTKNSH KLALIKNQIR KQKKEGDFFN QKLFVNQLEE KYKSCIKSFK ST
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