| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1188 |
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| Symbol | |
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| ID | 3765995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 1107438 |
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| End bp | 1108514 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637797716 |
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| Product | twitching motility protein |
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| Protein accession | YP_397683 |
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| Protein GI | 78779571 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.231991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAA CACAATTAAT GTCTGATTTA GTTAAAAGAA ATGGGTCAGA TTTACATCTG
ACTGGCAATT CTGTTCCCTT TTTTAGGGTG CAAGGTCAAA TAGTGCCTGC TGATTCAGAA
ATTTTCTCTT CTGAAGAATT AAAGGATCAA TTAACTAAAA TTCTCGGAGG TGAGAAAATG
GTTAACTTTG AGAAAGAAAA AGAATTGGAT TGTAGTTATG GTCTTAAAGG AATTGCGCGA
TTCAGAATAA ATATCTTTTT TGATAGGGGT AATATTTCAT GTGTGATGAG GGCTTTAAGT
ACTTCCATTC CAAGTTTTTC TAAAATTGGA TTGCCTGATA GTGTTCAGCA ACTATTAAAT
AGACCAAGAG GCCTAATGCT GGTAACCGGA CCCACCGGTT CTGGTAAGAC TACTACATTA
GCAAGTTCAA TTGATTGGAT AAATAGTAAT AAAGCCCATC ATATTCTTAC CATTGAAGAT
CCCATAGAGT TTATTTATGA AAACAAAAAT TGTCTTATTA GGCAAAGAGA AGTAGGTGAA
GACACATACT CTTTTTCAAA AGCTTTGAGA TCCGCTCTTC GAGAAGATCC GGATATTATT
CTCGTTGGCG AGATGAGAGA TTTGGAAACA ATAAGTCTTG CTATAACAGC AGCTGAAACT
GGACATTTAG TAATGGGAAC CCTTCATACT GCCTCAGCAT CGCAGACCAT TGATAGGATT
ATTGATGTTT TCCCCACCTC TCAACAAACA CAAGTTAGAG TTCAACTTTC TTCTTCTTTG
ATAGGAGTAA TTTCTCAAAC ACTATGTAAA ACTATTGACA ATAAAAGATC TTTAGCGGCT
GAAATTCTTG TGAATAATAA TGCAATTGCT AATTTAATCA GGGAAGCAAA GTCGTCTCAA
GTATATTCTC AACTTCAAAT TGGAACAAAA TTTGGGATGC AAACCTTAGA GCAACATTTA
TCTAACTTAG TAAAGAGGGG AGTAATCACA AATGAAGAGG CAATTTATAA GTGCAATAGA
CCAACAGTTT TAAAAGGACT TTTAGAGGAA TTAAACCCTA CGTCTAAAGA AGAATAA
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| Protein sequence | MKLTQLMSDL VKRNGSDLHL TGNSVPFFRV QGQIVPADSE IFSSEELKDQ LTKILGGEKM
VNFEKEKELD CSYGLKGIAR FRINIFFDRG NISCVMRALS TSIPSFSKIG LPDSVQQLLN
RPRGLMLVTG PTGSGKTTTL ASSIDWINSN KAHHILTIED PIEFIYENKN CLIRQREVGE
DTYSFSKALR SALREDPDII LVGEMRDLET ISLAITAAET GHLVMGTLHT ASASQTIDRI
IDVFPTSQQT QVRVQLSSSL IGVISQTLCK TIDNKRSLAA EILVNNNAIA NLIREAKSSQ
VYSQLQIGTK FGMQTLEQHL SNLVKRGVIT NEEAIYKCNR PTVLKGLLEE LNPTSKEE
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