| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1099 |
|---|
| Symbol | |
|---|
| ID | 3765903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 1011296 |
|---|
| End bp | 1013824 |
|---|
| Gene Length | 2529 bp |
|---|
| Protein Length | 842 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637797624 |
|---|
| Product | Clp protease ATP-binding subunit |
|---|
| Protein accession | YP_397594 |
|---|
| Protein GI | 78779482 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.372897 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAA GGTTTACAGA AAAGGCTATA AAAGTCATTA TGCTTGCCCA AGAGGAAGCG
AGAAGACTTG GTCATAATTT CGTTGGAACA GAACAGATTT TATTAGGTCT AATTGGTGAG
GGTACAGGAG TTGCGGCAAA GGTTCTTAAA TCACTAGGTG TCAATTTAAA AGATTCAAGA
ATAGAAGTAG AAAAAATAAT TGGTAGAGGT TCAGGATTTG TAGCTGTAGA AATACCCTTT
ACCCCTAGGG CGAAAAGAGT CTTAGAATTA TCTCTTGAAG AAGCGCGTCA ATTGGGTCAT
AATTATATAG GGACTGAACA TCTTTTACTG GGTTTAATAA GAGAAGGTGA GGGCGTAGCT
GCAAGGGTGC TAGAAAATCT AAGTATTGAT CTCACTAAAG TGAGAACTCA AGTCATAAGG
ATGCTTGGTG AAACAGCTGA AGTCGGAAGT GGAGCTAATT CAAGCAAGGG TAATTTAAAA
ACGGCAACTC TTGATGAATT TGGAACAAAT TTAACAAAGC TTGCTAGTGA ATCAAAACTC
GATCCAGTAG TTGGCCGTTA TGCAGAAATA GATCGCGTAG TCCAAATATT AGGTAGAAGG
ACTAAAAATA ATCCCGTTCT TATCGGTGAA CCTGGCGTAG GTAAAACTGC TATTGCAGAG
GGTTTAGCTC AAAGAATACA GCTAGGAGAT ATTCCTGACA TACTTGAAGA TAAAAGAGTT
TTAACTCTTG ATATAGGACT CTTGGTCGCT GGAACAAAAT ATAGAGGAGA ATTTGAGGAA
AGATTGAAAA AGATAATGGA AGAAATTAAA TCTGCCGGTA ATGTAATACT TGTTATAGAT
GAAGTGCATA CTTTAATTGG TGCTGGAGCT GCTGAAGGTG CTATAGATGC AGCAAATATT
CTGAAGCCAG CCTTAGCCCG AGGAGAACTC CAATGTATTG GAGCAACAAC ACTCGATGAA
TATAGAAAAC ATATTGAAAG AGATGCCGCT CTAGAGAGAA GATTCCAACC TGTAATGGTT
GGTGAACCAT CTATTGAAGA TACGATCGAA ATCTTAAAAG GTCTTCGAGA ACGTTATGAA
CAACATCATC GCTTAAAAAT TACTGATGAA GCTTTAGAAG CTGCAGCGCA CCTAGGAGAT
CGATATATAT CCGATAGGTT CTTGCCCGAT AAAGCTATAG ACCTTATCGA TGAGGCAGGA
AGTAGAGTAC GTTTAATAAA CTCTAAACTT CCACCTGAAG CAAAACAAAT AGACAAAGAA
CTGAGACAAA TTCAAAAACA AAAGGAAGAA TCTGTCAGAG ATCAAAATTT TGATCAAGCT
GGCCAATTAA GAGAAAAGGA GATCGAATTA TCTGCAAAAA TTAAAGAGGT TCTTGAAAAT
AAAAAAGAAT CTACAACTGA GGATGAATCT AGTGTTGATA CAAACTCAGT AAAAAATGAT
TCAAAACTTT TACAAAACCC TATGGTTAAT GAAGAGGACG TAGCACATAT TGTTGCATCT
TGGACTGGTG TACCTGTTCA AAAATTAACT GAAACTGAAT CAGTCAAGCT ACTCAATATG
GAGGAAACAC TTCACCAAAG GCTAATTGGA CAAGATGAAG CTGTAAAAGC TGTTTCTAGA
GCTATCAGAA GAGCAAGAGT TGGTTTAAAA AATCCAAATA GGCCCATCGC AAGTTTTATC
TTTTCAGGAC CTACTGGTGT AGGAAAAACT GAATTGACTA AATCATTAGC TTCCTACTTC
TTCGGTAGCG AAGAAGCCAT GATTAGATTA GATATGTCAG AATTTATGGA AAGACATACT
GTTAGTAAAC TTATAGGTTC CCCTCCGGGA TATGTCGGTT TTAATGAAGG TGGTCAACTT
ACTGAGGCGG TTAGAAGAAG ACCTTATACC GTTGTTTTAT TTGATGAAGT AGAGAAAGCT
CATCCAGATG TATTCAATTT GTTATTACAA CTTCTTGAGG ACGGTAGACT AACAGATTCC
AAAGGTAGAA CTGTAGATTT TAAAAATACT TTGCTAATAA TGACTTCTAA TATTGGTTCA
AAAGTGATTG AGAAAGGTGG AGGCGGCTTA GGATTTGAGT TTTCTGGTGA TTCTGTTGAA
GATAGTCAAT ACAATAGAAT TAAATCTTTA GTTAATGAAG AACTAAAGCA ATACTTCAGA
CCTGAATTTT TAAATAGACT TGATGAAATA ATTGTATTCA GGCAACTATC TAAAAACGAG
GTTAAAGAAA TTGCTGAAAT TATGTTACAA GAGGTTTTTG CAAGACTAGA AGATAAGGGC
ATTAAATTAA GCGTAACTGA TGCTTTCAAA GAAAGACTTG TTGAAGAAGG CTATAATCCT
TCATATGGAG CACGACCCTT AAGAAGAGCT GTTATGCGAT TATTAGAGGA TAGTTTGGCT
GAAGAAGTTC TTTCAGGAAG AATAAAAGAT GGAGACAAGG CTTTAGTTGA TATAGACGAT
AATAAAAAAG TTACAATCAA TATTTCTTCT GAAGAGTCTT CTCAAGAGTT AGCAAGTGCT
AACTTTTAG
|
|---|
| Protein sequence | MFERFTEKAI KVIMLAQEEA RRLGHNFVGT EQILLGLIGE GTGVAAKVLK SLGVNLKDSR
IEVEKIIGRG SGFVAVEIPF TPRAKRVLEL SLEEARQLGH NYIGTEHLLL GLIREGEGVA
ARVLENLSID LTKVRTQVIR MLGETAEVGS GANSSKGNLK TATLDEFGTN LTKLASESKL
DPVVGRYAEI DRVVQILGRR TKNNPVLIGE PGVGKTAIAE GLAQRIQLGD IPDILEDKRV
LTLDIGLLVA GTKYRGEFEE RLKKIMEEIK SAGNVILVID EVHTLIGAGA AEGAIDAANI
LKPALARGEL QCIGATTLDE YRKHIERDAA LERRFQPVMV GEPSIEDTIE ILKGLRERYE
QHHRLKITDE ALEAAAHLGD RYISDRFLPD KAIDLIDEAG SRVRLINSKL PPEAKQIDKE
LRQIQKQKEE SVRDQNFDQA GQLREKEIEL SAKIKEVLEN KKESTTEDES SVDTNSVKND
SKLLQNPMVN EEDVAHIVAS WTGVPVQKLT ETESVKLLNM EETLHQRLIG QDEAVKAVSR
AIRRARVGLK NPNRPIASFI FSGPTGVGKT ELTKSLASYF FGSEEAMIRL DMSEFMERHT
VSKLIGSPPG YVGFNEGGQL TEAVRRRPYT VVLFDEVEKA HPDVFNLLLQ LLEDGRLTDS
KGRTVDFKNT LLIMTSNIGS KVIEKGGGGL GFEFSGDSVE DSQYNRIKSL VNEELKQYFR
PEFLNRLDEI IVFRQLSKNE VKEIAEIMLQ EVFARLEDKG IKLSVTDAFK ERLVEEGYNP
SYGARPLRRA VMRLLEDSLA EEVLSGRIKD GDKALVDIDD NKKVTINISS EESSQELASA
NF
|
|---|
| |