Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0973 |
Symbol | |
ID | 3765776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 906464 |
End bp | 908170 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637797497 |
Product | multidrug ABC transporter |
Protein accession | YP_397469 |
Protein GI | 78779357 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGACTAA TACCACCAGT CAGACCATAT TTAGATAGGT TCATAAAGGG TTTTATATGC ATGCTTATAT ATGTAGCTTG TTGGCCTTTG TTAGCTTATT TAGCTGGAAA CTTAATCCCA GCAATTGGAT CAGGTGATCT ATCAAAAGTT TCTAGCATAA TAATTAAGTC TTTATTAGTA TTTTTAATTC AAAAAACTGC TCAATTTGGA CAGGATGTAT TCATAGCAAA ACCATCATTA GAAATTAGTG AAGTAATGAG GGGAAATTTA TTTAGCAAAA TTCAAAAAAT AGATATGACT TCTGTCCAGA AGATTTCAGC CGGAGATATC ACATACAGAC TTACAGAGGA TGCTGATAGA GTAAGCGAAG TTATTTATAA AACAGCTCAG GATACTATTC CATGTACCTT ACAATTATTA GCTGTAATAA TATATATGTT TTATTTAGAT TGGTCACTCA CATTATCAAC GTTTTTTTTA GCACCATTGA TTATTCTTTC AGTTAATAGT TTTGGAAGAA GAGTTTTATT CGCATCTGAG AAAAGTCAAG AATCAACCAG TAATTTAGCA GAATTAATAG GTGAATCTAT AAATGGAATG TCGACGATAA GAGCTTTTGC TGCAGAAAAT TGGATTGAGA ATAGATTTTA TAAAAGATTA ATTGCAAATA AAAAAGCAAA ATATAAAACA TTAAAATTAC TAGCATTTCA GCATCCAGTT GTAGGCTTCA TAGAGGCATT TGGAATATTA GCAATATTAG GTTTAGGCGC CGCAAGAATT AATTTAGGCC TTCTAACTAG TGAAGAATTT AGTAGTTTTT TTGCTGCAAT ATTGATGCTT ATTGATCCAA TAAGCCATGT AAGTACAAAT TTTAATGATT TTAAACAGGC AGAAGCATCA ATAAAAAGGT TGAATAATAT AAATCTAGAA CCTATTGAAG ATAGTAAGAA AAATTTCAAA AAGTTATATA ATATTGAGGG CAATATACGT TTCAAGACTG TTAATTTTGA ATACAATAAA GATAATCAAG TTCTTAAAAA TATAAATTTA GAAATTAAAA AAGGTGAAGT TACAGCTTTC GTTGGAGCTT CAGGGGCTGG TAAAAGTACA ATGATGGCAT TGATATTGAA ATTTATAACT CCAAATAATG GAGACATTTT TATTGATGAT AAGAATCTAA AATTATTGAA TACAAAAGAT ATAAGAAAAA ATATTGCACT AGTACAACAA CAACCTTTTT TATTTTCAGG GAAAATTATT GATGTAATAA GAATGGGCAG GAGTTATACC GAAGAAGAAG TAATTGAATC AACAAAAAAA GCTAATGCTC ACCACTTTAT TGAAAATCTT CCTCATCAAT ATGAAACTAA GATAACTGAA AGAGGATCAA ATTTCTCAGG TGGTCAGATC CAGAGGATAG CAATTGCTAG AGCAATACTA GGAAACCCAT CTATTCTTCT TTTAGATGAG GCTACAAGCG CATTAGATGC AGAATCTGAG TCAGAAGTTC AAGAAGGGCT TAATAGAGCA ATGAAAGATA GAACAGTTAT TGTAATTGCT CATAGATTAG CCACTACACA AGGGGCAGAT AAAATAGTTG TCTTCGATAA GGGCGAAATT GTTGAGGTTG GGAAACATAT TGATTTACTA AATAAAAAAG GGATTTATAA AGAATTATGT GAAAAACAAT TGATTAAAAA GTTATGA
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Protein sequence | MRLIPPVRPY LDRFIKGFIC MLIYVACWPL LAYLAGNLIP AIGSGDLSKV SSIIIKSLLV FLIQKTAQFG QDVFIAKPSL EISEVMRGNL FSKIQKIDMT SVQKISAGDI TYRLTEDADR VSEVIYKTAQ DTIPCTLQLL AVIIYMFYLD WSLTLSTFFL APLIILSVNS FGRRVLFASE KSQESTSNLA ELIGESINGM STIRAFAAEN WIENRFYKRL IANKKAKYKT LKLLAFQHPV VGFIEAFGIL AILGLGAARI NLGLLTSEEF SSFFAAILML IDPISHVSTN FNDFKQAEAS IKRLNNINLE PIEDSKKNFK KLYNIEGNIR FKTVNFEYNK DNQVLKNINL EIKKGEVTAF VGASGAGKST MMALILKFIT PNNGDIFIDD KNLKLLNTKD IRKNIALVQQ QPFLFSGKII DVIRMGRSYT EEEVIESTKK ANAHHFIENL PHQYETKITE RGSNFSGGQI QRIAIARAIL GNPSILLLDE ATSALDAESE SEVQEGLNRA MKDRTVIVIA HRLATTQGAD KIVVFDKGEI VEVGKHIDLL NKKGIYKELC EKQLIKKL
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