| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0485 |
|---|
| Symbol | |
|---|
| ID | 3765284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | - |
|---|
| Start bp | 453971 |
|---|
| End bp | 454816 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637797005 |
|---|
| Product | exodeoxyribonuclease III |
|---|
| Protein accession | YP_396982 |
|---|
| Protein GI | 78778870 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0708] Exonuclease III |
|---|
| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.229415 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTAATAG CAACTTGGAA TGTTAACTCT ATAAGAACCA GACTTTCACA AATAATAGAT
TGGATGAATC AAGTCAATCC AGATATTCTA TGTTTGCAGG AAACAAAAGT AATGGATAAT
AGTTTCCCAT TTGAACCTTT TGAAAAATTA GGATACTCAG TGGAGGTCTA CGGACAAAAA
GCATATAATG GTGTTGCTAT TATTTCTAAA ATAAAAGCAG AAAATGTTAA AAAAGGATTC
TACGGTTGTT CAGACTCTGA TCAAAATGCC GAAATTTTCC TTGATCAAAA AAGATTAATT
TCTGCTGATA TTAATGGTAT CAAGATTATA AATGTCTATG TGCCAAATGG ATCTTCTCTA
GAATCTAATA AGTTCGAATA CAAAATTAAT TGGTTAAGTA GTTTAGCTTC ATATTTGGAT
GAGCAAGAAA AAAAAGGAGA ATTAATTTGT CTTATGGGTG ATTTTAATGT TGCTCCCTCT
AACTTGGATA TTTATGATCC CAAGAAATAT GAAGGAGGAA TAATGGCATC TGAGATAGAG
AGAAATGCAC TAAATAATGT TCTGAAAGAA AGATTAATAG ATTCTTTTAG GATTTTTGAA
AAAAATCCTG GCCATTGGAG TTGGTGGGAT TACCGTAATA ACGCTTATGA ATTAAATAAA
GGTTGGAGGA TAGACCATAT CTACATCAGC AAAGAACTGT CATCAAAACT TAAAAGTTGT
GTCATAGACA GCTCACCAAG AGCGAATTTA CGTCCAAGTG ATCATGCACC AGTAATGATT
GATCTTAACT TGAACGATAT AAATGTAGAT TTTTTTGAGG AAGAGGATAA TTTTTTCGAA
ATATAA
|
|---|
| Protein sequence | MLIATWNVNS IRTRLSQIID WMNQVNPDIL CLQETKVMDN SFPFEPFEKL GYSVEVYGQK
AYNGVAIISK IKAENVKKGF YGCSDSDQNA EIFLDQKRLI SADINGIKII NVYVPNGSSL
ESNKFEYKIN WLSSLASYLD EQEKKGELIC LMGDFNVAPS NLDIYDPKKY EGGIMASEIE
RNALNNVLKE RLIDSFRIFE KNPGHWSWWD YRNNAYELNK GWRIDHIYIS KELSSKLKSC
VIDSSPRANL RPSDHAPVMI DLNLNDINVD FFEEEDNFFE I
|
|---|
| |