Gene PMT9312_0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0336 
Symbol 
ID3765131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp323860 
End bp324630 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content24% 
IMG OID637796852 
Productpeptidoglycan-binding LysM 
Protein accessionYP_396833 
Protein GI78778721 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.230507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAGC TAATGAAATC AGTATTTTTA ATAATTGCAA TCCTAATAAA TCTTTTTAGT 
CATTCATTCA TAAAATCTGA AGAAAAGATT GATTCAGCAA CTAATAAAAT TGAGAATGTT
GCTAAAAAAA ATTTAATTCC TGAAGATAAA ACTGAAATAA GAAAAATTCA TATCGTCAAA
ATTGGAGATA CAATTACAAG TATTTCAAAA AACTATTCAA TCAATAAAGA TTTAATCATT
AAATTGAATA ATTTAAAAGA TGATAATTAT ATCTTTATTG GCCAAAATCT TATTATCTCT
GAATCTACTA AAAATTCTAC ACAACAATCA GATTTAATAA ATAATTATCA TATTGTTCAA
ATAGGAGAAA ATCTTACTGA GATATCCAAC AAATATAAAT TAAATTTAGG ATATTTGATA
GAAATTAATA ATCTCAAGAA TCCAGACTCT ATAAAAGTTG GGCAAAAGCT CTTCTTGAGA
AAAAACAAGC CAATTAGTTT AGAAAATGAT CAAATAATTA AAAATAAACA AAATGAATTA
CTTGAGTTAG ATAAACAAAT TTATGGTCCA ATAATTATTC AAAGTAAATC TTATGAAGAA
TTTAAAGGTA GAAAAGTTTT CAATGTACTA AATCAAGATA ATAAAAAACT GATTCTTTCA
ATAAATTGCG ATACAAATGA ATTAGATGTA AGAATCCCAG GCAGAAAATG GAGGGGAGGG
GAGCCTGCTA AAGAAGAATT CGAAAAAAAT TTAATAAATG ATTTTTGTTA G
 
Protein sequence
MIKLMKSVFL IIAILINLFS HSFIKSEEKI DSATNKIENV AKKNLIPEDK TEIRKIHIVK 
IGDTITSISK NYSINKDLII KLNNLKDDNY IFIGQNLIIS ESTKNSTQQS DLINNYHIVQ
IGENLTEISN KYKLNLGYLI EINNLKNPDS IKVGQKLFLR KNKPISLEND QIIKNKQNEL
LELDKQIYGP IIIQSKSYEE FKGRKVFNVL NQDNKKLILS INCDTNELDV RIPGRKWRGG
EPAKEEFEKN LINDFC