Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0336 |
Symbol | |
ID | 3765131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 323860 |
End bp | 324630 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 24% |
IMG OID | 637796852 |
Product | peptidoglycan-binding LysM |
Protein accession | YP_396833 |
Protein GI | 78778721 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.230507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAGC TAATGAAATC AGTATTTTTA ATAATTGCAA TCCTAATAAA TCTTTTTAGT CATTCATTCA TAAAATCTGA AGAAAAGATT GATTCAGCAA CTAATAAAAT TGAGAATGTT GCTAAAAAAA ATTTAATTCC TGAAGATAAA ACTGAAATAA GAAAAATTCA TATCGTCAAA ATTGGAGATA CAATTACAAG TATTTCAAAA AACTATTCAA TCAATAAAGA TTTAATCATT AAATTGAATA ATTTAAAAGA TGATAATTAT ATCTTTATTG GCCAAAATCT TATTATCTCT GAATCTACTA AAAATTCTAC ACAACAATCA GATTTAATAA ATAATTATCA TATTGTTCAA ATAGGAGAAA ATCTTACTGA GATATCCAAC AAATATAAAT TAAATTTAGG ATATTTGATA GAAATTAATA ATCTCAAGAA TCCAGACTCT ATAAAAGTTG GGCAAAAGCT CTTCTTGAGA AAAAACAAGC CAATTAGTTT AGAAAATGAT CAAATAATTA AAAATAAACA AAATGAATTA CTTGAGTTAG ATAAACAAAT TTATGGTCCA ATAATTATTC AAAGTAAATC TTATGAAGAA TTTAAAGGTA GAAAAGTTTT CAATGTACTA AATCAAGATA ATAAAAAACT GATTCTTTCA ATAAATTGCG ATACAAATGA ATTAGATGTA AGAATCCCAG GCAGAAAATG GAGGGGAGGG GAGCCTGCTA AAGAAGAATT CGAAAAAAAT TTAATAAATG ATTTTTGTTA G
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Protein sequence | MIKLMKSVFL IIAILINLFS HSFIKSEEKI DSATNKIENV AKKNLIPEDK TEIRKIHIVK IGDTITSISK NYSINKDLII KLNNLKDDNY IFIGQNLIIS ESTKNSTQQS DLINNYHIVQ IGENLTEISN KYKLNLGYLI EINNLKNPDS IKVGQKLFLR KNKPISLEND QIIKNKQNEL LELDKQIYGP IIIQSKSYEE FKGRKVFNVL NQDNKKLILS INCDTNELDV RIPGRKWRGG EPAKEEFEKN LINDFC
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