Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0306 |
Symbol | |
ID | 3765094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 291366 |
End bp | 293774 |
Gene Length | 2409 bp |
Protein Length | 802 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637796815 |
Product | ATP-dependent DNA helicase Rep |
Protein accession | YP_396803 |
Protein GI | 78778691 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCTCAAA CCAACAATTT CCTTTTTAAG TCCCTAAACA AACAACAACT TCAAGCAGTA AAACATGTTT ATGGACCACT ATTAGTTGTA GCAGGTGCAG GTAGCGGAAA AACTAAGGCT CTTACTCACA GAATTGCAAA CCTTATAGAG GGTAACTCTA TAGATCCCTA TAACATTCTG GCAGTCACTT TCACTAACAA AGCTGCTAAA GAAATGAAAG CAAGATTAGA GGTTCTTCTA GCCCAAGAAT TAGCTTTTAA TCAATTTGGT CAGCCTTGGA CAACTCTCAA AGAAATTGAT CAAAATCAAT TAAGAACAAA CGTTCACCAA GAGAGGCTTC AGAACCTTTG GATCGGTACT TTCCATTCTT TATTTTCAAG ACTTCTGAGA TACGATATTG AAAAATATAC TGATCCAGAA GGCCTAAAAT GGACGAGGCA ATTTTCAATT TACGATGAAA CAGATTCTCA AACATTAGTA AAAGAAATTA TCAGTCAAGA TATGAATCTT GACCCAAAAA GATATGATCC CAAAAAGATT AAAAGATTAA TAAGTAATGC TAAAAATCAA TGCTTAACTT CTAATGATCT TTTAGAAAAA GCAGATAATA ATTTTGATAA AACAGTTGCA GAAGCCTACA GGAGATATAG AATTTCGCTT TCAAAAAATA ATTCTTTAGA TTTTGATGAT CTTCTACTTT TGCCTGTTTT CTTATTAAGA CAAAATGATA TGGTCAGAGA TTACTGGCAC AAAAGATTTA AACATATTTT AGTTGACGAA TATCAAGATA CAAATAGAAC ACAATATGAA CTTATAAAAT TAATTACGGC TGGAAATACT GAACCAAAAA AATTCTTCAA TTGGGAAGAT CGGTCAATTT TTGTAGTTGG GGATGCTGAT CAAAGTATTT ATAGTTTCAG AGCAGCTGAC TTCAGAATTT TAATTGGTTT TCAAGAAGAT TTTAAAACTT CAATCAACGA CGATACAAAA TCATCTTTAA TTAAATTAGA AGAAAATTAT AGGTCATCTT CTAATATCCT TGATGCTGCA AACTCACTAA TTGAAAACAA CTCTGAAAGA ATTGACAAAG TTTTAAAGGC TACTAAAGAA AAAGGGGAAC TTTTAACGTT ACTCAGCTGT GATGATGAAA TTTCCGAGGC AGAAGCAATT ACCAATAAAA TAAAATCACT CAATAACTAT AATCAAAACC CAATTTGGAA AAATTTTGCA ATTTTATATC GAACCAGGGC TCAGTCAAGA GTATTAGAAG AATCTCTTGT AAGGTGGCGC ATTCCTTATA CAATTTTTGG AGGATTGCGT TTTTATGATA GAAGAGAAAT TAAAGATGCA ATAGCATATT TGAAAGTTCT GGTTAATTCT TCAGATAACG TTAGTCTTTT GCGAATCATA AATGTTCCTA GAAGAGGGAT TGGTAAGACT ACTATTCAAA AACTTAATGA ATTATCTAAT AGGTTAAATA TCCCATTATG GGAGGTTCTT AATGATAAGC AAAGTCTTGA AGAAACAATA GGCCGATCAT CAAAAGGAAT TAATAAATTT ACTGAAGTTA TGAATGATCT ACTGTGTTAC CTAGAAAATT CAGGCCCCGC TCAACTACTA CAACTTATAT TAGAAAAAAG TGGTTATTTA AGTGACTTGC TCTCTAATGG GACTGAAGAA TCTGAAGATA GAAGAAATAA CTTACAAGAA CTAATTAATG CAGCTACTCA ATATGAAGAA GAAACAGAAA GTGGGGATGT AGAGGGATTT CTTTCTACAG CAGCCTTAAC AACTGATAAT GATACGAAAA AAAATAATCC CAACTCTGTA ACTCTCATGA CTCTGCATAA TAGTAAAGGT TTAGAATTTC AAAATGTTTT TATCACTGGG CTAGAACAAG GTCTCTTCCC TAGCCATAGA TCAATAGATA CTCCCTCACT TCTTGAAGAG GAAAGAAGAT TATGCTATGT AGGTATTACT AGAGCTAAAG AAAGAGTTTT CTTAAGTCAT GCTAGAGAAA GAAGATTATG GGGTGGAATG CGTGAAGCAA CAATTCCTTC AATATTTCTT TCAGAAATAC CTGAAGATTT AATGGATGGC GAATTACCAC AAACTGGTGG TGCTTCAATT AGAAGAGATT GGCATCTTGA ACGTTTAACT AGAGTTGATC GAAACAATCC AAATGAATTT GTTAACAAAC CAATAAATGC AGTAAGGAAA TTATATTCAG GTCCCAGTAA AGGGAAAAGC TGGATAGTTG GAGATAAGCT AATTCACTCA AAGTTTGGGA AAGGTGAAAT CATACATATT TTTGGGAGTG GGGAAAAAAT ATCTTTAGCA GTAAAATTTG GTGATAAAGG AAGTAAAATT CTAGATCCCA GATTAGCTCC AATTCGTTAT GTAAGTTAA
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Protein sequence | MPQTNNFLFK SLNKQQLQAV KHVYGPLLVV AGAGSGKTKA LTHRIANLIE GNSIDPYNIL AVTFTNKAAK EMKARLEVLL AQELAFNQFG QPWTTLKEID QNQLRTNVHQ ERLQNLWIGT FHSLFSRLLR YDIEKYTDPE GLKWTRQFSI YDETDSQTLV KEIISQDMNL DPKRYDPKKI KRLISNAKNQ CLTSNDLLEK ADNNFDKTVA EAYRRYRISL SKNNSLDFDD LLLLPVFLLR QNDMVRDYWH KRFKHILVDE YQDTNRTQYE LIKLITAGNT EPKKFFNWED RSIFVVGDAD QSIYSFRAAD FRILIGFQED FKTSINDDTK SSLIKLEENY RSSSNILDAA NSLIENNSER IDKVLKATKE KGELLTLLSC DDEISEAEAI TNKIKSLNNY NQNPIWKNFA ILYRTRAQSR VLEESLVRWR IPYTIFGGLR FYDRREIKDA IAYLKVLVNS SDNVSLLRII NVPRRGIGKT TIQKLNELSN RLNIPLWEVL NDKQSLEETI GRSSKGINKF TEVMNDLLCY LENSGPAQLL QLILEKSGYL SDLLSNGTEE SEDRRNNLQE LINAATQYEE ETESGDVEGF LSTAALTTDN DTKKNNPNSV TLMTLHNSKG LEFQNVFITG LEQGLFPSHR SIDTPSLLEE ERRLCYVGIT RAKERVFLSH ARERRLWGGM REATIPSIFL SEIPEDLMDG ELPQTGGASI RRDWHLERLT RVDRNNPNEF VNKPINAVRK LYSGPSKGKS WIVGDKLIHS KFGKGEIIHI FGSGEKISLA VKFGDKGSKI LDPRLAPIRY VS
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