| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_0298 |
|---|
| Symbol | |
|---|
| ID | 3765086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9312 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007577 |
|---|
| Strand | + |
|---|
| Start bp | 285106 |
|---|
| End bp | 286122 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637796807 |
|---|
| Product | Ycf48-like protein |
|---|
| Protein accession | YP_396795 |
|---|
| Protein GI | 78778683 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTATTACCAG TTTTCCCAAT CTTCTCTTAT CTATACTTCT TTGCTTCGTT
TTAAGTAGTT GTTCATCTAC AGGAGTGAAG ATGAGTGATA GTAGCCCTTG GAAAACAATT
CAGTTTCAGG ATCAGGCAAA TGCCCTAGAT GTTGATTTTA TAGATAATAA TAATGGATTT
TTAGTAGGTT CTAATAGACT TATTATGGAA TCAAATGATG GGGGAGAAAC GTGGGAGAAA
AGGAATTTAG ATTTACCAAG TGAAGAGAAC TTTCGTCTTA TAGATATTGA TTTTAAAGGT
CAAGAGGGAT GGTTGATAGG CCAGCCCTCA TTGGTTATGC ATACACTTGA TGCGGGGAAA
AATTGGACTC GTTTATCTCT AGGTAACAAA TTGCCAGGCC AGCCATATCT AATAACGACT
GTTGATGATG GGGTTGCGGA ATTGGCTACC ACTGCAGGTG CTATCTATCA AACATCAGAT
AGTGGTGAAT CATGGAATGC AAAGGTTCTT GACGCATCTG GTTCAGGTGG TGTAAGAGAT
TTGAGAAGAA CTGATAAAGG AGATTATGTC AGCGTAAGTA GTCTGGGTAA TTTCTTTTCT
ACTTTGGAAA ATGATAGTAA TTCATGGATC GCTCATCAAA GAGCTAGTAG CAAAAGAGTT
CAAAGTATTG GTTTTAATCC AGAAGGAAGT TTATGGATGC TTTCTAGAGG GGCAGAAATT
AGATTTAATG AAGATACTAA TGACCTAGAA AATTGGTCTA AGCCTATTAT ACCAATTCTT
AATGGATACA ATTATCTAGA TATGGGATGG GATCCAAATG GTGATATATG GGCTGGCGGG
GGTAATGGAA CTTTAATAGT AAGTAAAGAT CAAGGTAAAA CTTGGAATAA ATATCCTATT
GCTGCTGAAT TGCCAACAAA CTACATTAAA ATAGTTTTTC TTGATAAGGA GGCTTTAGAC
AATCAAAAAG GATTTGTACT TGGCGAGCGT GGTTATATCC TTAAATGGAA TAGCTAA
|
|---|
| Protein sequence | MKKIITSFPN LLLSILLCFV LSSCSSTGVK MSDSSPWKTI QFQDQANALD VDFIDNNNGF
LVGSNRLIME SNDGGETWEK RNLDLPSEEN FRLIDIDFKG QEGWLIGQPS LVMHTLDAGK
NWTRLSLGNK LPGQPYLITT VDDGVAELAT TAGAIYQTSD SGESWNAKVL DASGSGGVRD
LRRTDKGDYV SVSSLGNFFS TLENDSNSWI AHQRASSKRV QSIGFNPEGS LWMLSRGAEI
RFNEDTNDLE NWSKPIIPIL NGYNYLDMGW DPNGDIWAGG GNGTLIVSKD QGKTWNKYPI
AAELPTNYIK IVFLDKEALD NQKGFVLGER GYILKWNS
|
|---|
| |