Gene PMT9312_0293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0293 
Symbol 
ID3765081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp281578 
End bp282963 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content33% 
IMG OID637796802 
Producthypothetical protein 
Protein accessionYP_396790 
Protein GI78778678 
COG category[S] Function unknown 
COG ID[COG0391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01826] conserved hypothetical protein, cofD-related 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATC AAAAAAAAAG AATTAGAAGA TATTATAAGT ATTTTGAAAA GTCCAAATTT 
GTCTTGCTAA ATGAAATTTT AAGAATTTTG AGTTGGCTTT TACCAGGCTT GGTAATAAAA
AGATGGATGA TTACATCTGC AATTGGATTT TTGACATCAT TATTAGGACT AGTAATTTGG
ACAAATTTAA GGCCACTCTA TTGGCTTATT GAAGTATTTT TTGGGATAAT GACAGGCTTA
ACTAGTATCT TACCTGTTTC ATTATTGGGG CCATTAATTT TTGTTCTTGG ACTTTTATTA
ATTGGGATTG GACAAAATAG AAGTATTAAT TCTATTAAAA AAGCCCTTGC TCCAGAAAAA
AGCACATTTT TAGTTGATGC ATTAAGAGTT AAGAGTAAAT TAAACAGGGG CCCTAATATT
GTCGCAATTG GTGGAGGAAC AGGCTTATCT ACTTTATTGA AAGGCTTAAA AAATTACAGC
AGTAATATTA CAGCAATCGT AACTGTATCC GATGATGGCG GAAGTAGTGG AATTCTTAGA
AAACAATTAG GTGTCCAACC TCCAGGAGAT ATTAGAAATT GTTTGGCTGC CTTATCAAAC
GAAGAACCAA TTTTAACTAG ATTATTTCAA TATAGATTTT CAGGAGGTAG TGGCCTAGAG
GGTCATAGTT TTGGGAATCT ATTTTTGTCA GCTTTAACAA CAATTACAGG TAGTTTAGAA
AAAGCAGTAC AAGCCTCTAG TAAGGTTTTA GCTGTACAAG GTCAAGTTTT ACCTGCTACA
AATATTGATG TAATGTTATG GGCTGAATTA GAGGATGGTC AAAAAATTTT TGGTGAAAGC
AATATCAGTA AATCTAAAAA ATTAATTTCA AAGATTGGAT ACTTGCCAGA AAATCCTTCT
GCTCTCCCAA GTGCTCTGGA ATCTATAAAA GAAGCTGACT TAATTGTTCT TGGCCCTGGT
AGTCTATACA CTTCCTTATT GCCAAACTTA TTGGTACCCG AGATAGTAGA TGCTTTATTG
CAAAATAATG CTCCCAAAAT TTATATAAGT AATTTGATGA CTCAGCCTGG CGAAACAGAT
GGACTTAATG TTTATCAACA TATCAAATCA ATAGAAAAAC AATTATCAAA TTTTGGAGTT
AATACTAGAA TTTTTAATGC GATTCTATCT CAGGCTCTAT TTGAAAAGTC TCCTCTAGTA
GACTATTACG CAAGTAGGGG AGCAGAACCT GTCCAATGTA ATAAAGAAAA ATTATTATCT
GAGGGTTATT ATGTTTTGCA GGCACCATTG TATTCAAGAA GAATCACTCC CACTCTTAGA
CATGATCCTA GGAGACTAGC AAGAGCGGTT ATTTTCATGT ACCGCAAATT AAAGAAATTA
AACTAA
 
Protein sequence
MNNQKKRIRR YYKYFEKSKF VLLNEILRIL SWLLPGLVIK RWMITSAIGF LTSLLGLVIW 
TNLRPLYWLI EVFFGIMTGL TSILPVSLLG PLIFVLGLLL IGIGQNRSIN SIKKALAPEK
STFLVDALRV KSKLNRGPNI VAIGGGTGLS TLLKGLKNYS SNITAIVTVS DDGGSSGILR
KQLGVQPPGD IRNCLAALSN EEPILTRLFQ YRFSGGSGLE GHSFGNLFLS ALTTITGSLE
KAVQASSKVL AVQGQVLPAT NIDVMLWAEL EDGQKIFGES NISKSKKLIS KIGYLPENPS
ALPSALESIK EADLIVLGPG SLYTSLLPNL LVPEIVDALL QNNAPKIYIS NLMTQPGETD
GLNVYQHIKS IEKQLSNFGV NTRIFNAILS QALFEKSPLV DYYASRGAEP VQCNKEKLLS
EGYYVLQAPL YSRRITPTLR HDPRRLARAV IFMYRKLKKL N