Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0204 |
Symbol | rplJ |
ID | 3764989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 196037 |
End bp | 196564 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637796711 |
Product | 50S ribosomal protein L10 |
Protein accession | YP_396702 |
Protein GI | 78778590 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCCGAA CACTAGAGAA TAAGCAACAA ATCGTTACTG AGATTAAATC TCTCTTAAAC GACTCGGAAA TGGCTGTAGT TCTTGACTAT AAAGGTTTAA CTATCAAAGA GATGTCAGAT TTGCGATCTA GATTGCAAAC AACTAACGGC ATTTGTAAAG TTACTAAAAA TTCATTAATG CGTAAAGCTA TTGATGGAGA TAGTAATTGG AATGATCTTG AATCTTTACT GACCGGAACA AATGCTTTTG TCTTAATTAA AGAAGATGTA GGAGGCGCTG TAAAAGCGAT CCAATCTTTT CAAAAAGACA CCAAAAAATC CGAAACCAAA GGAGCTTTAT TTGAAGGCAG ACTTCTTAGC AATTCTGAAA TAAAAGAAAT TGCAAGTCTT CCATCTAAAG AAGTATTGAT GGCAAAAATT GCTGGCGCTC TAAATGGCGT TGCAACAAAA ATTGCTATCT CTATCAATGA AGTGCCTTCT GGGCTTGCTA GATCACTTAA ACAACATTCT GAAAAACCAG AATCTTAA
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Protein sequence | MGRTLENKQQ IVTEIKSLLN DSEMAVVLDY KGLTIKEMSD LRSRLQTTNG ICKVTKNSLM RKAIDGDSNW NDLESLLTGT NAFVLIKEDV GGAVKAIQSF QKDTKKSETK GALFEGRLLS NSEIKEIASL PSKEVLMAKI AGALNGVATK IAISINEVPS GLARSLKQHS EKPES
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