Gene PMT9312_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0170 
Symbol 
ID3764955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp162961 
End bp163662 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content29% 
IMG OID637796677 
ProductMg-protoporphyrin IX methyl transferase 
Protein accessionYP_396668 
Protein GI78778556 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID[TIGR02021] magnesium protoporphyrin O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.493478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCAA ATAAGATTAT CGAAAAAAGT GAAGTTAGGG AGTATTTTAA TGGCACTGGC 
TTTGAAAGAT GGAACAAAAT TTATAGCAAA TCTGATGAAA TTAATACAGT TCAAAAAAAT
ATTAGAAAAG GACATCAAAA GACTGTAGAT GATGTAGTTT CATATATCAA AAATTATCCT
GAACTAACAA AAAAAAGTTT TTGTGATGCA GGATGTGGTG TAGGAAGTCT ATCTATACCT
TTACTAAGAC TTGGTATAAA AGATTTACAG GTAAGCGATA TTTCTTGTGA AATGATTAAA
GAAACAAAGA AACGCATAAA AGAATTAGCT TTGAACAAAG CTAAAATCAA ATATGAAGTC
TGTGATCTGG AACAATTAAA AGGATTATTT GATGTTGTAG TTTGTTTGGA TGTATTTATT
CATTATCCTC AACCGGTCGC AGAAGAAATG GTTCAACATT TATGCGATTT AAGCAAAGAA
AAACTAATTG TTAGCTTTGC TCCGTATACT CCAGTTCTTG CTGTTCTAAA AAATATAGGT
AAATTATTTC CTGGCCCAAG TAAAACTACA AGAGCTTATA CTTTAAAAGA AAAGGGCATT
ATTAATGCTG CTAAAGAAAA AGGATTTAAC GTCGTGAAAA CGAAATTAAA TCAAGCTCCT
TTTTATTTTT CAAAACTAAT TGTATTCGAA AAAAATAAAT AA
 
Protein sequence
MTSNKIIEKS EVREYFNGTG FERWNKIYSK SDEINTVQKN IRKGHQKTVD DVVSYIKNYP 
ELTKKSFCDA GCGVGSLSIP LLRLGIKDLQ VSDISCEMIK ETKKRIKELA LNKAKIKYEV
CDLEQLKGLF DVVVCLDVFI HYPQPVAEEM VQHLCDLSKE KLIVSFAPYT PVLAVLKNIG
KLFPGPSKTT RAYTLKEKGI INAAKEKGFN VVKTKLNQAP FYFSKLIVFE KNK