Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0145 |
Symbol | |
ID | 3764930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 140056 |
End bp | 140964 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637796652 |
Product | squalene and phytoene synthase |
Protein accession | YP_396643 |
Protein GI | 78778531 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAATT CAATTTCTCA ACTAGATCAA GCATATGAAA TATGCCGTAA AGAAACTCAA CAATGGGCTA AAACCTTTTA CTTGGGAACT CTTCTACTAC CAGTAGAAAA GAGAAAAGCT ATTTGGGCTA TTTATGTATG GTGCAGAAGA ACAGATGAAA TAATGGATAG CTTAGAAGCT TCAACTAAAT CGCAAGATGA GCTTTCAGAT AATTTAGATG CATGGGAAGA AAATACAAAG AATGTATTCA AAGGGAATAT TAAATCTGAA CTAGATTCAG TTCTATTAGA TACCATCGAA AAATATCCAC AAAGTATTCA ACCCTACCTA GACATGATAG AAGGTCAGAG GATGGATCTT AATAAATTCA GATACAAAGA TTTTGATGAA TTAAAACTCT ATTGTTATAG AGTGGCAGGG ACTGTTGGTT TAATGACTCA GAATGTCATG GGCATTGATA AAGCTTATAC ATCCGCACCA TGGAGTTCTA AGCCTGACCC CTCAGAAGCA GCTATAGCTT TAGGAATAGC CAACCAATTA ACTAATATAT TGAGAGATGT AGGAGAAGAC AGAGAACGAG GTAGAATTTA TCTCCCACAA GCAGATATTG AAAAATTTAA TTATTCTGAA GAAAAACTTT TAAACGGCGA AATAAATAAA CAATGGAAAG CATTGATGAA GTTTCAATTA AGTAGGGCTC GCGATTGGTT TCATAAATCT GAAGAAGGGA TTAAGTGGCT CTCCTCTGAC GCAAGATGGC CAGTTTGGAC ATCGTTACGT CTTTACAGAG GAATATTAGA TTCAATTGAA AGGTTAGACT ATGATGTCTT TAATAATAGA GCTTTTGTAA AGAATTCAGT TAAAGCCTTT GAGATACCAA TATCTTTTTT AATTTCTCGA ATTAAATAA
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Protein sequence | MKNSISQLDQ AYEICRKETQ QWAKTFYLGT LLLPVEKRKA IWAIYVWCRR TDEIMDSLEA STKSQDELSD NLDAWEENTK NVFKGNIKSE LDSVLLDTIE KYPQSIQPYL DMIEGQRMDL NKFRYKDFDE LKLYCYRVAG TVGLMTQNVM GIDKAYTSAP WSSKPDPSEA AIALGIANQL TNILRDVGED RERGRIYLPQ ADIEKFNYSE EKLLNGEINK QWKALMKFQL SRARDWFHKS EEGIKWLSSD ARWPVWTSLR LYRGILDSIE RLDYDVFNNR AFVKNSVKAF EIPISFLISR IK
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