Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_0080 |
Symbol | |
ID | 3764863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | + |
Start bp | 84525 |
End bp | 85814 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637796584 |
Product | recombination factor protein RarA |
Protein accession | YP_396577 |
Protein GI | 78778465 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTCCG AAAATTTATT TACCAATTAT TCTCAAATAG AAAGTAATGC TCCTTTGGCA GATAAGTTGA GACCAAAGAA TTTAGACGAT TTTTTTGGTC AAAAATCAAT CTTAAATGAG AATTCGCTCT TAAGGAGTGC CATATTAAAC GATAAGATTA GTAATTTTAT TTTTTCTGGC CCTCCTGGTG TGGGGAAAAC TACTTTAATT GAAATTATTG CTTTTAATAC GCGTTCAAAA TTAATTAAAT TAAACGCTGT ATTATCAAGT ATCAAAGAAT TAAGAAATGA AATCGCTAAT GCAAAAGAAA GATTAATAAA TACAAAAAGA AAAACAATTT TATTTATCGA TGAGGTGCAT AGATTTACAT CTGTGCAGCA AGATGCTTTA TTACCCTCAA TAGAGAATGG AACTATAACT TTTATAGGTG CTACAACTGA AAACCCCTTC TTTGCAGTTA ATAAAGCGCT TGTTAGTAGG TCTCGCATTT TTACATTAAT TCCTTTAAGT GAAACTGATT TGAAGAAAAT TATAAAAAAA GTTATAAGTT ACTATGCAAA ACTTAAGGAA CCAAAAAAGG TTTGTTTAAC TCAGGATGCA ATAAATCATT TAATTAAATT TTCTGGTGGT GATGCAAGAA CACTAATCAA TGCATTAGAG ATGGCAATAG GAACAACTGA TGAAAATGAA GCTGAAGAAA TTAATATTAA TCTCTCAATT GCAGAGGATG CAATTCAAAA GAAAAATATT GTTTACGATA AAAATGGTCA AAATCATTAC GATATAGTAA GTGCATTTAT TAAGTCCATT AGAGGTTCTG ATCCAGATGC AACTTTATTT TGGCTTGCAA ATATGCTGGA AGCTGGCGAA GATCCTAATT TTATTTTTAG AAGACTTCTT ATATCTGCCA GTGAAGATAT TGGGATTGCT GATCCTAATG CCATAGTAGT TGTACAATCG TGTTGTAATG CTTTTGATAG AGTTGGTTTT CCAGAGGGAT TATATTTTTT AACACAAGCT TCCTTGTATT TAGCTATTTC TCCAAAAAGT AATAGTACGA AAAAGATTTT TAAAGCAATT GAAACATTCA AATCTATCAA TGCTTATGAA GTTCCAAGTC ATTTAAAAAA TAATTCTAAT AGTTATGTTA ATCCTCATAA TTATCCAGGA AATTGGGTCG CACAAGAATA TCTTCCCATA GCTGTACGAG GTTTAAAAAT ATGGGAACCA AATAATAATG GATGGGAAAA AATTAAATAT GATGAATTGC TTAGAAGAAA AGAAAACTAA
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Protein sequence | MHSENLFTNY SQIESNAPLA DKLRPKNLDD FFGQKSILNE NSLLRSAILN DKISNFIFSG PPGVGKTTLI EIIAFNTRSK LIKLNAVLSS IKELRNEIAN AKERLINTKR KTILFIDEVH RFTSVQQDAL LPSIENGTIT FIGATTENPF FAVNKALVSR SRIFTLIPLS ETDLKKIIKK VISYYAKLKE PKKVCLTQDA INHLIKFSGG DARTLINALE MAIGTTDENE AEEININLSI AEDAIQKKNI VYDKNGQNHY DIVSAFIKSI RGSDPDATLF WLANMLEAGE DPNFIFRRLL ISASEDIGIA DPNAIVVVQS CCNAFDRVGF PEGLYFLTQA SLYLAISPKS NSTKKIFKAI ETFKSINAYE VPSHLKNNSN SYVNPHNYPG NWVAQEYLPI AVRGLKIWEP NNNGWEKIKY DELLRRKEN
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