Gene PMT9312_0070 details

Gene Information

• Locus tag: PMT9312_0070
• Symbol: def
• ID: 3764853
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9312
• Kingdom: Bacteria
• Replicon accession: NC_007577
• Strand: -
• Start bp: 73488
• End bp: 74093
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637796574
• Product: peptide deformylase
• Protein accession: YP_396567
• Protein GI: 78778455
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.805375
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCAAACC ATTTTTCACA ACTTGCAAAA AAGTCAAAAA CAAATGGGAA CTCGGAAAAA 
ATTGCAAAAG AACAAACAGG TAAGCCATCT CTCGAAATTT ATAAACTTGG TGATGATGTT 
TTAAGACAAA ATTCCAAAAG AATAACTAAG GTTGATGAAT CGATTAGAAA ACTTACTAGA 
GAAATGATTC AAAGCATGTA TGCGGCCAAA GGAATTGGAC TTGCTGCACC TCAAATTGGT 
ATTAATAAAG AGCTTCTTGT GATTGATGTA AATTTTGAAG ATTCAGCTGC AGAACCTTTA 
ATCTTAATCA ATCCAGAAAT TACAGACTAT GGAACAACCC TGAATTCATA CGAAGAAGGC 
TGCTTGAGCA TACCTGGTGT ATATTTAAAT GTAGTAAGAC CATCAACTAT AAAATTAAAA 
TTTAGAGATG AAATGGGAAG ACCACGTAAA ATGAAAGCAG ATGGACTTTT AGCTAGGTGT 
ATTCAACACG AAATGGATCA CTTAAATGGA ATATTATTTG TTGATAGAGT TACATCAAAG 
GATGACTTAA AAAAAGAACT TATAAAAGAA GGGTTTCACG AAAAAGACGT TATTTCGATA 
ACTTAA 

 

Protein sequence

MANHFSQLAK KSKTNGNSEK IAKEQTGKPS LEIYKLGDDV LRQNSKRITK VDESIRKLTR 
EMIQSMYAAK GIGLAAPQIG INKELLVIDV NFEDSAAEPL ILINPEITDY GTTLNSYEEG 
CLSIPGVYLN VVRPSTIKLK FRDEMGRPRK MKADGLLARC IQHEMDHLNG ILFVDRVTSK 
DDLKKELIKE GFHEKDVISI T