| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1871 |
|---|
| Symbol | |
|---|
| ID | 3607283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | + |
|---|
| Start bp | 529216 |
|---|
| End bp | 530229 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637688764 |
|---|
| Product | protochlorophyllide oxidoreductase |
|---|
| Protein accession | YP_293062 |
|---|
| Protein GI | 72383707 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | [TIGR01289] light-dependent protochlorophyllide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTAG TACAAGCGGC ACCAGGAACT GTATTGATTA CTGGAACAAC ATCAGGAGTT
GGGTTATATG CCACAAAGTC TTTGGTTGAG AGGGGGTGGA GAGTTATTAC TGCTAATAGA
TGTTCTTTGA GAGCTGAAGC GTCTGCATCC GCAGTTGGAT TACCTACCAA TAGTCCAAGA
CAACTTAAAC ATATACAAAT TGATCTTGGC GACTTGGATA GCGTACGTAA TGGGGCTAAA
AGTCTTCTAG AAGATTTGGA AAAGCCATTG GATGCTTTGG TTTGTAATGC TGCTGTATAT
CTTCCGCGTT TAAAAAAACC TTTGAGATCT CCACAGGGAT ATGAAATATC AATGGCAACG
AATCATTTTG GGCACTTTTT ATTAATTCAG ATGCTATTGG AAAATCTTAG TAAGTCTTCA
AGACCAGTTT GGAAGGGAAG ATCTTGGGGG GTGGAATCAT CTAGAGTGGT TATCTTAGGA
ACAGTAACTG CTAACAATAA AGAACTTGGC GGGAAAATAC CAATACCAGC TCCTGCTGAT
CTGGGAAATC TATCTGGTTT TGAAGAAGGT TTTTGCGATC CCATCTCAAT GGCTAGTGGA
AAACGTTTTA AACCAGGGAA AGCCTATAAA GACAGTAAGT TATGCAATAT GATTACAACC
CAAGAATTAC ATAGGCGATT TAATTCTTCT CCAATTCTTT TTAGTTCTCT ATATCCAGGA
TGTGTAGCTA ATACTAGATT ATTTAGAAAC ACTCCTAAAC TATTTCAGTG GTTGTTTCCA
TGGTTTCAGA AATTAATAAC AGGAGGTTTC GTAAGTGAAG CACTGGCTGG CGATAGAGTC
GCCCAAGTTG TTTCAGACCC TCAATTTGCT ATTTCTGGAG TTCATTGGAG TTGGGGTAAT
AGACAACGCA AGGATAGACA ACAATTTTCA CAAGAATTGT CTGATCGAGT CACTGATCCA
GTGACCTCTA GAAAAGTTTG GGAATTGTCT ATGCGATTAG TTGGGCTGAA ATAA
|
|---|
| Protein sequence | MALVQAAPGT VLITGTTSGV GLYATKSLVE RGWRVITANR CSLRAEASAS AVGLPTNSPR
QLKHIQIDLG DLDSVRNGAK SLLEDLEKPL DALVCNAAVY LPRLKKPLRS PQGYEISMAT
NHFGHFLLIQ MLLENLSKSS RPVWKGRSWG VESSRVVILG TVTANNKELG GKIPIPAPAD
LGNLSGFEEG FCDPISMASG KRFKPGKAYK DSKLCNMITT QELHRRFNSS PILFSSLYPG
CVANTRLFRN TPKLFQWLFP WFQKLITGGF VSEALAGDRV AQVVSDPQFA ISGVHWSWGN
RQRKDRQQFS QELSDRVTDP VTSRKVWELS MRLVGLK
|
|---|
| |