Gene PMN2A_1767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1767 
Symbol 
ID3607177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp431751 
End bp433313 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content39% 
IMG OID637688658 
ProductNAD(P)H-quinone oxidoreductase subunit 2 
Protein accessionYP_292958 
Protein GI72383603 
COG category[C] Energy production and conversion 
COG ID[COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 
TIGRFAM ID[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.506609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGAAC TTTTGTCTTT TCAAATATTC ATAAATGAAC CTGTGGAGCT TTTAAATCTT 
TCTTTAAATG CCAAAGCTGT TCTTCCAGAG GCTGCCGTTC TAATGGCAAT GCTTGGAACA
CTTTTGGTTG ATTTGGCTGG TGAAAAGATA TCAGCCCGCT GGTCCCCTCC AATATGTTAC
GCAGGTCTTG GTAGTGCTTT GATTTTGCTG GCAATGCAAT GGGATGGAGA AATTCAAGAA
TCTTTTTTAG GTGCATTTAT TGCAGACAAT CTTGCTATTG CTTTTAGAGG GGTGATAGTT
CTTTCAACTC TTATTTCTCT ACTTATAAGT TGGAGATATG CTGATCAAAA TGGAAGTCCT
ATTGGTGAAT TTGCTGCAAT ATTATTAGCT GCCACTCTTG GAGCAATGCT TCTATGTGGT
TCAACTGATT TGGTCAGTGT TTTCGTGTCA TTGGAAACAC TTTCCGTGGC TAGCTATCTG
CTTTCTGGAT ATCTCAAAAG AGACTCAAGA AGTTCAGAAG CAGCTTTGAA ATATCTGTTA
GTTGGTTCTG CTGCAGCAGC TGTATTTTTG TATGGAGCAT CCCTCCTCTA TGGAATAAGT
GGGTCTACAA ATTTAAAAGA AATAGGAACA ACTTTACTAA GTGCTCCTAC ACCTTTGTCT
GCATTAGCAC TGGTTTTCGT ATTATCTACA GTAGCTTTCA AAATTGCAGC AGTTCCATTT
CATCAATGGA CACCCGATGT TTACGAAGGT TCTCCTACGC CAGTAGTTGC CTTCTTATCA
GTAGGTTCCA AAGCAGCAGG TTTTGCACTC GCAATAAGAA TACTAGTCGG ATGTTTTAGT
GCTTTTGACA CACAATGGAA ATTGCTATTT ACTGTTTTAG CTGTTCTCAG TATGTCTCTG
GGAAATGTTG TAGCGCTAGC TCAAAAATCA ATGAAAAGGA TGCTTGCTTA TAGTTCAATT
GGACAAGCTG GCTTTGTAAT GATTGGCTTG GTTTGCGGAA CTGAAGATGG TTTCGCCGCA
ATGGTTCTAT ACATGGCTGC TTATTTGTTT ATGAATCTTG GCGCTTTTGC CTGCATAATC
CTTTTCTCAA TCAGAACGGG TAGTGATCAA ATTTCAGATT ATGCAGGACT GTACCAAAAA
GATCCATTAA TCACATTAGG ATTAAGTTTA TGCCTTCTTT CCTTGGGAGG TATTCCTCCA
ATGTTGGGAT TCTTCGGGAA GATTTATTTA TTTTTTGCTG GATGGGCAGA TGGGCAATAC
TTACTAGTAA CTGTCGGCCT AGTTACGTCA GTTATTTCAA TTTACTACTA CATATCAGTT
ATAAAAATGA TGGTAGTAAC AGAACCTAAA GAAGCCTCAG ATGTTGTAAA AGCATATCCA
TCAATAGAAT GGTCAATTCC TGGGATGTCA TCTCTCAAAG TGGCATTGAT TTTTTGTGTT
CTCGTAACTG CTATTGGTGG AATTATTTCA AACCCTCTCT TCAATTTTGC AGATAGTGCG
GTAAACGGAA CGCCATTACT TCGTGAAGCC ATTACTCTTG CAAGTAAAAG TTCAATTGGT
TAA
 
Protein sequence
MGELLSFQIF INEPVELLNL SLNAKAVLPE AAVLMAMLGT LLVDLAGEKI SARWSPPICY 
AGLGSALILL AMQWDGEIQE SFLGAFIADN LAIAFRGVIV LSTLISLLIS WRYADQNGSP
IGEFAAILLA ATLGAMLLCG STDLVSVFVS LETLSVASYL LSGYLKRDSR SSEAALKYLL
VGSAAAAVFL YGASLLYGIS GSTNLKEIGT TLLSAPTPLS ALALVFVLST VAFKIAAVPF
HQWTPDVYEG SPTPVVAFLS VGSKAAGFAL AIRILVGCFS AFDTQWKLLF TVLAVLSMSL
GNVVALAQKS MKRMLAYSSI GQAGFVMIGL VCGTEDGFAA MVLYMAAYLF MNLGAFACII
LFSIRTGSDQ ISDYAGLYQK DPLITLGLSL CLLSLGGIPP MLGFFGKIYL FFAGWADGQY
LLVTVGLVTS VISIYYYISV IKMMVVTEPK EASDVVKAYP SIEWSIPGMS SLKVALIFCV
LVTAIGGIIS NPLFNFADSA VNGTPLLREA ITLASKSSIG