Gene PMN2A_1766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1766 
Symbol 
ID3607176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand- 
Start bp431051 
End bp431737 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content38% 
IMG OID637688657 
ProductATPase 
Protein accessionYP_292957 
Protein GI72383602 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.104306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAGT CTGTAGCGCG ACTAACTAAT ATAAATAAAT TTTATGGGGA AGGCTCAGTC 
AAAGTGAAAG CTCTTGACGA ACTAAACCTT GAGGTTTATC AGGGCGATTA CCTTGCTGTT 
ATGGGTGCAA GTGGATCTGG GAAAAGTACT GCAATGAATA TACTTGGATG CCTTGATCGT 
CCTACTAATG GGACTTATGA ATTAAATGGA ACTGCTGTAG AAAAGCTTGA TGATGACTTG 
CTAGCAGATA TTAGAAACAA AGAACTTGGT TTTGTTTTTC AACAATTTCA TCTGCTTCAA 
GAAGTTTCAG CACTTGAGAA TGTCATGCTT CCAATGATTT ATGCATGTGT CCCCTCTTTA 
GAGAGAGAGA AGCGAGCTGA AGAGGCTCTT AAACGAGTAG GGCTTGGGAA TAGGATGACC 
AATCTTCCTA ATCAATTATC AGGTGGACAA CAACAACGAG TTGCCATAGC AAGGGCAATA 
ATCAATAAAC CATCCCTTTT ATTAGCAGAC GAACCAACTG GTGCTCTTGA TTCCAAAACT 
ACTGAAGATG TTTTAAATCT GTTTGACCAA CTTCATAGTC AAGGAATCAC AATTGTCTTA 
GTTACTCATG AAGACAATGT TGCTCAAAGA GCAAAAAAAA TAGCACGGTT TAGAGATGGC 
AAAGTAATAG AGATTACTCA TAATTAG
 
Protein sequence
MKKSVARLTN INKFYGEGSV KVKALDELNL EVYQGDYLAV MGASGSGKST AMNILGCLDR 
PTNGTYELNG TAVEKLDDDL LADIRNKELG FVFQQFHLLQ EVSALENVML PMIYACVPSL 
EREKRAEEAL KRVGLGNRMT NLPNQLSGGQ QQRVAIARAI INKPSLLLAD EPTGALDSKT 
TEDVLNLFDQ LHSQGITIVL VTHEDNVAQR AKKIARFRDG KVIEITHN