Gene PMN2A_1755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1755 
Symbol 
ID3607165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp421759 
End bp422610 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content38% 
IMG OID637688646 
Productputative ABC transporter, oligopeptides 
Protein accessionYP_292946 
Protein GI72383591 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.581834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGAGGTT TTTTAAGACG AAATAATTTG TCGACACGGT TATTTTTCGC TGGGCTGATA 
ATTTTATCCA TATATATAGG CATCTCTATT TTTGTGCCAC TATTAATAAC TTTAGAGATT
GTGCCTAATG GTGAATTTGG TTTAGGCAAC CCGATTTTTT CGGCTCCATC GATAGATCAC
TGGTGTGGAA CTGATCGACT AGGAAGAGAT GTTTGTATTA GAACTTTGGC TGCGAGTGGA
GTTGCGTTAC AAGTTGTTTT TGTTGCCGTA TCTCTTGCCG TTCTCGTAGG AATTCCTTTG
GGACTTTTAA GTGGCTATAT CGGTGGCCTT GTAGATAGGG TTTTGGTACT TTTCATGGAT
ACTCTTTATA CAATTCCTGT CCTTCTTCTT TCTGTGGTGA TGGCATTTTT ATTGGGTAGA
GGCATATTGA ATGCATCAAT AGCATTGTGT GTCGTTTATA TTCCTCAATA TTTTCGACTT
GTTAGGAACC AGACTTCACA GGTTAAATCA GAACTTTATA TTGAGGCAGC AATATCAATG
GGAGCATCCC CTTTGTGGGT AATAAGAAAG TACCTTCTTA AAAATGTTCT TACTTCTGTC
CCTGTAGTTT TAACCCTTAA TGCTGCAGAT GCAGTATTAG TTCTTGGGGG ATTAGGATTT
CTTGGATTAG GTCTTCCTGA GAATATTCCA GAATGGGGAA GTGATTTAAA TATGGCATTA
GTTGCATTAC CTACTGGTAT CTGGTGGACA GCGATCTATC CTGGTATGGC TATGTTCGTT
TTAGTGCTGG GACTGTCTTT TATTGGAGAA GGCTTGGAGA AAATTTTAAG TGAAACTAGT
CTTCAGAATT AA
 
Protein sequence
MRGFLRRNNL STRLFFAGLI ILSIYIGISI FVPLLITLEI VPNGEFGLGN PIFSAPSIDH 
WCGTDRLGRD VCIRTLAASG VALQVVFVAV SLAVLVGIPL GLLSGYIGGL VDRVLVLFMD
TLYTIPVLLL SVVMAFLLGR GILNASIALC VVYIPQYFRL VRNQTSQVKS ELYIEAAISM
GASPLWVIRK YLLKNVLTSV PVVLTLNAAD AVLVLGGLGF LGLGLPENIP EWGSDLNMAL
VALPTGIWWT AIYPGMAMFV LVLGLSFIGE GLEKILSETS LQN