Gene PMN2A_1692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1692 
Symbol 
ID3607094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp358358 
End bp359881 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content46% 
IMG OID637688575 
Productphotosystem II PsbB protein (CP47) 
Protein accessionYP_292883 
Protein GI72383528 
COG category 
COG ID 
TIGRFAM ID[TIGR03039] photosystem II chlorophyll-binding protein CP47 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTGC CCTGGTATCG GGTGCACACA GTCGTTATCA ACGACCCCGG CCGTCTCTTG 
GCCGTGCACC TCATGCATAC TGCTTTGTTA GCCGGCTGGG CCGGCTCAAT GGCCTTATAT
GAATTGGCCA TTTTTGATCC TTCTGATCCA GTACTTAATC CAATGTGGCG CCAAGGCATG
TATGTCATGC CCTTTATGGC CCGCCTAGGA ATTACAGGCA GCTGGAACGG ATGGGATATA
ACTGGAGCAA CCGGAGTTGA CCCCGGTTTC TGGAGCTTCG AAGGTGTTGC TGCAGCTCAT
ATAGTTTTCA GTGGTCTCCT GATGCTTGCT GCCGTATGGC ACTGGACATA TTGGGACCTT
GAATTGTGGG AAGATTCCCG CACTGGAGAG CCAGCTTTAG ATCTTCCAAG AATATTTGGA
ATTCATCTTT TCTTAGCAGG CCTTACATGC TTTGGCTTTG GTGCATTTCA TTGTTCATCA
GTAGGCATAT GGGTTTCTGA TCCATATGGA TTAACTGGGC ATGTAGAAAA AGTTGCTCCA
GTCTGGGGTG CAGAAGGATT TAATCCATTC AATGCTGGAG GAATTGTCGC CAATCATGTT
GGGGCAGGAC TTTTAGGAAT AATTGGTGGA ATATTCCATA TCACCAATAG ACCTGGAGAA
AGGCTCTACA GGGCTCTAAA GCTAGGAAGT CTTGAAGGCG TTCTAGCAAG TGCTTTGGCA
GCTGTTCTTT TTGTATCCTT CGTAGTTGCT GGAACAATGT GGTATGGATC AGCAACAACT
CCAGTGGAAT TATTTGGTCC TACTAGATAT CAATGGGATT CTGGTTATTT CAAAACTGAA
ATCAACCGCA GAGTGCAAGA ATCTATGAAT GATGGTGCAT CGAAAGCTGA GGCTTATGCA
TCTATTCCTG AGCAACTTGC TTTCTACGAC TATGTAGGTA ATAGTCCCGC CAAAGGAGGA
CTATTTAGAG TTGGTGCAAT GGTTAATGGA GATGGAGTTC CGAGTGGATG GCAAGGTCAC
ATCTCATTTA CTGATAGCGA TGGCAATGAC TTAGAAGTAA GAAGAATTCC AAATTTCTTT
GAGAACTTCC CTGTCATTCT TGAAGACAAG GATGGGAATG TCAAAGCTGA CATTCCTTTC
CGTCGAGCCG AAGCTAAGTA CTCCATTGAA CAAACTGGAG TCACAGCTAC TGTTTATGGT
GGTGAATTAA ATGGACAAAC ATTTACTGAT CCAGTAATAG TTAAACGTCT AGCTAGAAAA
TCTCAGCTTG GAGAGGCCTT CAAGTTTGAC AGAGATAGAT ACAAGTCAGA TGGTGTATTC
AGAAGCTCTC CAAGAGCCTG GTTCACTTAT GCTCACTTGT GTTTTGGCTT ACTATTCCTC
TTCGGGCACT GGTGGCACGC CGCTAGGACT CTATTTGGCG ACAGATTCTC AGGTATCGAT
CCAGAGCTTG GGGATCAGGT TGAGTTTGGT CTCTTCAAAA AACTTGGAGA CGAATCTACC
CGCCGAGTTC CTGGTCGAGC CTAA
 
Protein sequence
MGLPWYRVHT VVINDPGRLL AVHLMHTALL AGWAGSMALY ELAIFDPSDP VLNPMWRQGM 
YVMPFMARLG ITGSWNGWDI TGATGVDPGF WSFEGVAAAH IVFSGLLMLA AVWHWTYWDL
ELWEDSRTGE PALDLPRIFG IHLFLAGLTC FGFGAFHCSS VGIWVSDPYG LTGHVEKVAP
VWGAEGFNPF NAGGIVANHV GAGLLGIIGG IFHITNRPGE RLYRALKLGS LEGVLASALA
AVLFVSFVVA GTMWYGSATT PVELFGPTRY QWDSGYFKTE INRRVQESMN DGASKAEAYA
SIPEQLAFYD YVGNSPAKGG LFRVGAMVNG DGVPSGWQGH ISFTDSDGND LEVRRIPNFF
ENFPVILEDK DGNVKADIPF RRAEAKYSIE QTGVTATVYG GELNGQTFTD PVIVKRLARK
SQLGEAFKFD RDRYKSDGVF RSSPRAWFTY AHLCFGLLFL FGHWWHAART LFGDRFSGID
PELGDQVEFG LFKKLGDEST RRVPGRA