Gene PMN2A_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1643 
Symbol 
ID3607044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp311342 
End bp312793 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content29% 
IMG OID637688524 
ProductDNA repair enzyme 
Protein accessionYP_292834 
Protein GI72383479 
COG category[R] General function prediction only 
COG ID[COG2251] Predicted nuclease (RecB family) 
TIGRFAM ID[TIGR03491] RecB family nuclease, putative, TM0106 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.845174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATGTA ATAAATCCAA ACCAATTAAC GATCACCTTT TAAGGAGTTG GATTAGATGC 
AGAAGAAAAG CGTGGCTTGA TATTTATGGT GATAAACAAA AAAAGTTGTG GACGGCCCAC
AGCACACTTC AATTAAATCA TCAAATCGAC TGCTTTCATA ATCTCTCACA AAAAAGTTAT
GGTATAGGAA TTCGAGCATG TGAAGAGGGG AAAAATATTG CTTATGGAGT CAGAATTAAA
TATCCTCTAA TAAAAAATAG ACTTATCAAA GCAAATTTAC CAATACTAAG GAAGACATCT
GGAGAGAGTA TTTGGGGGAA TTTTGCATAT CAACCTATAT TAGCTAGGCA AGGTAAAAAA
ATAACAAGAG AGCATAAATT AACACTTGCA TTGACTGGTT TATTAATAAA TAATTTACAA
AAATTTCAAG TAAAGAAAGG ATTAATATTA CACAAAGAAA ATGAAGTTAT CAAAGTCGAA
AAGATAAAAT TAAGCGATAA TATAAACACA GATTTAATAG GTTCATTATT ACATCTAGAA
AAAGATATTG AATCAAGAAC TCCTCCACCC ATAACTTCTA ATAGAAAAAA ATGCACAATA
TGTTCATGGA GAAAAGAATG TGATGCTGTA GCAATTAAAG AAGGAAGCTT AAGTGAAGTT
AGCGGGATTG GAGCAAAAAG AGAAGTTTTA TTAAACAAAA TTGGCATAAA TAATATAGAG
GAGCTAGCAA AGATCAAGCA TTATAAATTA CAGGAAAAGC TTGAAATATT TGGGACACAA
CATAGTGATA TTTCCAAACA AATTATTTTA CAATCTCAAT CTCAATCAAC GAATAGGGCA
ATCAAACTAA ATCCAGAAAT AGAACTAAAT AATCTAAAGA AAGCAAAAGG TTTATATATT
TATGATATTG AATCTGATCC AGATATTAGA CATGACTTTT TACATGGATT TATTCGATTA
CCAAAAAATA TAAAAAATGA AATAAGTTTA GAAAAAACTA AATACTCACC ATTACTTAAT
ATTGAAAAAA ACACTGAAAG TTTCCTATGG AAAAGAATAA CTAAAAAATT AAGTATTAAT
CAAGACTATC CCATTATCCA TTATGGGGAA ACAGAACCAA TATCTTTGCT AAAGCTAGGA
ATACGACAAG GAGCTAATCC TCATGAAATT GAAGAATTAA AAAACAGATT TATTGATATA
CATTTATTAA TTAGAGAATA CTGGTGTCTT CCCGTAAGAA ATTATGGTCT TAAATCAATC
GCAGAATGGA TAGGATTTGA ATGGAAACAA TCAAATGCAG ATGGAGCTAG AGCTCTCTTA
TGGTGGAGAC AATGGAAAAA ATCACGTAAA ATAAATAAAA TGTATTCCAG AAATTTAAAT
TCAATTTTTG AATATAATCG TGATGATTGT ATAGCCACCT TAATGATCGC AAAGTGGTTA
ATAGATCACT AG
 
Protein sequence
MKCNKSKPIN DHLLRSWIRC RRKAWLDIYG DKQKKLWTAH STLQLNHQID CFHNLSQKSY 
GIGIRACEEG KNIAYGVRIK YPLIKNRLIK ANLPILRKTS GESIWGNFAY QPILARQGKK
ITREHKLTLA LTGLLINNLQ KFQVKKGLIL HKENEVIKVE KIKLSDNINT DLIGSLLHLE
KDIESRTPPP ITSNRKKCTI CSWRKECDAV AIKEGSLSEV SGIGAKREVL LNKIGINNIE
ELAKIKHYKL QEKLEIFGTQ HSDISKQIIL QSQSQSTNRA IKLNPEIELN NLKKAKGLYI
YDIESDPDIR HDFLHGFIRL PKNIKNEISL EKTKYSPLLN IEKNTESFLW KRITKKLSIN
QDYPIIHYGE TEPISLLKLG IRQGANPHEI EELKNRFIDI HLLIREYWCL PVRNYGLKSI
AEWIGFEWKQ SNADGARALL WWRQWKKSRK INKMYSRNLN SIFEYNRDDC IATLMIAKWL
IDH