Gene PMN2A_1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1544 
Symbol 
ID3606942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand- 
Start bp214024 
End bp214944 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content37% 
IMG OID637688422 
Product1,4-dihydroxy-2-naphthoate octaprenyltransferase 
Protein accessionYP_292735 
Protein GI72383380 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR02235] 1,4-dihydroxy-2-naphthoate phytyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.423105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGTCTT CTACAACTGA AAGAAAACAT CTTTGGCAAG CCGCAATTAA GTGGCCACTG 
TATTCAGTCG CAATAATGCC AGTAATTGTG TCTGCAGGAT GGGAGCTAGG AAATAGCGGC 
AATATTCGGC TGGGACAATT CATCGGTTTT CTAATTGCCT CAATCTTGAT CTTGCTTTGG 
GAAAACCTTA CCAATGATCT TTTTGACGAT GAAACTGGTG TTGACAAATA CAAATTCCAC 
TCGGTAGTAG CTTTAACTGG TAATAAAACC ACTGTAAGTC GGGTTGCATA TTTTTCTCTT 
TTATTAGGTT TATTTATAAT ATTTATCCTC GCTCTAAAAA GTAAAATAAC AGTACTTTTT 
TTAGTCATAA TTTGTTGTTT CCTTGGATAT TTATATCAAG GGCCACCATT TAGACTGGGA 
TACAAGGGGT TGGGAGAACC CCTTTGCTGG ATTGCATTTG GACCACTTGC GACAGCTGCA 
GCACTAATTG TTATTTCTCC AAAATCTAAT TTTGATGCCA TCCCCTGGGG AACAGCACTG 
ATTGTTGGAG CAGGTCCCGC GATGGCGACT ACTTTGGTTT TGTTCTGTTC GCATTTTCAT 
CAAATCAATC AAGATGCTGC TGTTGGTAAA AAATCACCCC TAGTTGTTTT AGGCACTAAT 
CGAGCGGCAA ATTTTTTACC GTGGTTAGTT GGTCTAATAT TTCTATTGGA GTTATTACCA 
GTACTAAATG GCATATGGCC AATAACGACT CTTATGTGTT TAATAAGCCT TCCTTCAGGA 
TTAGATCTAA TCAAATTAAT TAAAAGACAT CACAATAAAC CAGAGCTCAT TAAAAACAGT 
AAGTTTTCAG CTCTTCGCTT TCAAACAATT AATGGTTTAT GTTTAAGTAT AGGTTTTGCT 
ACTTCCTATT TCTTTTTATA A
 
Protein sequence
MKSSTTERKH LWQAAIKWPL YSVAIMPVIV SAGWELGNSG NIRLGQFIGF LIASILILLW 
ENLTNDLFDD ETGVDKYKFH SVVALTGNKT TVSRVAYFSL LLGLFIIFIL ALKSKITVLF 
LVIICCFLGY LYQGPPFRLG YKGLGEPLCW IAFGPLATAA ALIVISPKSN FDAIPWGTAL 
IVGAGPAMAT TLVLFCSHFH QINQDAAVGK KSPLVVLGTN RAANFLPWLV GLIFLLELLP 
VLNGIWPITT LMCLISLPSG LDLIKLIKRH HNKPELIKNS KFSALRFQTI NGLCLSIGFA 
TSYFFL