Gene PMN2A_1447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1447 
Symbol 
ID3606844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp127975 
End bp129792 
Gene Length1818 bp 
Protein Length605 aa 
Translation table11 
GC content40% 
IMG OID637688323 
Productputative sodium/sulfate transporter, DASS family 
Protein accessionYP_292638 
Protein GI72383283 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.629217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAGA TATTCACTGT CTTAGAGAAT CCCAAAGCTG TCATAACTTT GGCAGTGTTA 
ATTATTGCTG TTTTTTTGTT CGTAAGCAGT GCGCTAGCTC CTGAACTGAC TGGACTTTTG
AGCGTTGCAT TATTGATGGC TACAGGAGTT CTTTCCCCTC AAAAAGCATT GGCTGGTTTT
GGAAGCCCTG CGTTGATTAC ATTGATGGGT TTATTTGCTG TTTCTGCGGC ACTTTTTAAA
AGTGGTGCCC TTGATCGTTT AAGGGAGTTA ATTGCTTCTG ACAGTATTCG AACTCCGCGC
AGATTGATCG CTTTGCTCGG ATTAGTTGTT GCTCCTGTCT CAGGTGTCGT TCCCAATACT
CCTGTGGTTG CTTCACTTTT ACCAGTAATC GAAGCTTGGT GCGTCAAGCG AAAACTATCT
CCATCACGTG TATTGTTACC ATTATCTTTT GCGACAGTAT TAGGTGGGAC TTTAACTCTT
TTAGGCAGTT CAGTGAATTT GTTGGTCAGC GATATTAGTG ATCAACTTGG TTACGGTCCC
TTTGATTTAT TTACTTTTAC AGCAATAGGA GTACCTATAT GGTTATTTGG GACAGCATAT
ATGTTGCTGG CTCCACAATC TTTATTGCCA GATAGAGGGA GAATTAGCTC AGAGTACGGA
GGAAGTTCGG ATCAAACTGG TTATTTTACC GAAGTCACAA TTCCTTCTGA TTCTGAACTT
GTTGGACATT CATTGAGAAA TAGCCGCTTA CAAAGAAGAT TTGATGTTGA TGTTCTAGAA
ATACAGCGAG AGAATGAAAT ACTTTTACCA CCTTTGGCCG ATCGGATAAT TCAGTCTGGT
GATCGGTTGT TGATAAGAAT TACGCGCTCT GATCTTTTGC GTTTAAAACA AGAACATACT
GTTCAGTTAA ATAAAAACTT AAGTATTGAA AAAAAATTTT TTCTGTCCAA CATTGATGAA
AGCCAACAAA CGGTAGAGGT TCTTTTACCA GCTGGTTCAA CCTTGGCTGG GGCAAGTTTG
CGTGAACTGC GATTTAGACA AAGACACAAT GCTACTGTTT TGGCCTTAAG ACGAGGTCAG
CAAACTGTTC AAGAGAGATT GGGGCAAGCA ATTTTGAGAG AAGGAGACGT ATTACTCTTA
CAAGCTCCAA GAGATTCAAT TCGTGGATTA CAGGATAGTA ATGACCTTCT TGTTTTAGAT
CAATTTGAGA ATGATCTACC CACGGTTACA AGAAAACCGA TAGCAATTGG CATCGCAATC
GCAATGTTGA TTATTCCCTC AATTACTGAC TTGCCTCTAG TAGCCTCAGT TCTAATGGCA
GTGATTGCTA TGGTCTGGGG AGGATGTTTA AGACCCGCAG AGGTACAAAG ATCAATCCGA
CTTGACGTCA TTCTTTTGCT TGGATCTCTT TCTAGTTTTA GTGTCGCAAT GCAGACCACT
GGTCTTGCTG ATGCTTTTGC CAATATTTTA ATTTTAATAT TAGAAGACTT ATCTACTTAT
TCAGCCTTAC TAGTAATTTT CCTCTCTACT ACAATATTTA CTCAATTTGT TAGTAATGCT
GCTTCAGTGG CTCTTTTGGC GCCAATTGCT GTTCAATTAG CCCCAAGTAT GGGGCTACCT
CCTTTAGCTT TATTGATAAC AGTTCTTTTT GGCGCCAGTC AATCTTTTCT TACTCCTATG
GGTTACCAGA CAAACCTTAT GGTATTTGGC CCTGGGCGTT ATCAGTTTTT AGATGTCACC
AGATACGGAG CTGGGTTGAC CATCTTGATG ACGCTTCTTG TCCCTGGGTT GATATTGCTA
AAGTATGGTA TTTCTTAA
 
Protein sequence
MNEIFTVLEN PKAVITLAVL IIAVFLFVSS ALAPELTGLL SVALLMATGV LSPQKALAGF 
GSPALITLMG LFAVSAALFK SGALDRLREL IASDSIRTPR RLIALLGLVV APVSGVVPNT
PVVASLLPVI EAWCVKRKLS PSRVLLPLSF ATVLGGTLTL LGSSVNLLVS DISDQLGYGP
FDLFTFTAIG VPIWLFGTAY MLLAPQSLLP DRGRISSEYG GSSDQTGYFT EVTIPSDSEL
VGHSLRNSRL QRRFDVDVLE IQRENEILLP PLADRIIQSG DRLLIRITRS DLLRLKQEHT
VQLNKNLSIE KKFFLSNIDE SQQTVEVLLP AGSTLAGASL RELRFRQRHN ATVLALRRGQ
QTVQERLGQA ILREGDVLLL QAPRDSIRGL QDSNDLLVLD QFENDLPTVT RKPIAIGIAI
AMLIIPSITD LPLVASVLMA VIAMVWGGCL RPAEVQRSIR LDVILLLGSL SSFSVAMQTT
GLADAFANIL ILILEDLSTY SALLVIFLST TIFTQFVSNA ASVALLAPIA VQLAPSMGLP
PLALLITVLF GASQSFLTPM GYQTNLMVFG PGRYQFLDVT RYGAGLTILM TLLVPGLILL
KYGIS