| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1323 |
|---|
| Symbol | uvrA |
|---|
| ID | 3606718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | - |
|---|
| Start bp | 1834417 |
|---|
| End bp | 1837359 |
|---|
| Gene Length | 2943 bp |
|---|
| Protein Length | 980 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637688199 |
|---|
| Product | excinuclease ABC subunit A |
|---|
| Protein accession | YP_292515 |
|---|
| Protein GI | 72383160 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0178] Excinuclease ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAGTC CGAAACCTAA TTCAAAAAAA AATGCATTAA ATAATGGTTC TTCTAGCGAA
GATGTCATAA CTATTCGTGG TGCAAGGCAA CATAATTTAA AAAACGTTGA TTTATCTATT
CCAAGAAATC AATTGGTTGT TTTTACAGGT GTTAGTGGAA GTGGTAAAAG TTCTTTAGCT
TTTGATACTA TTTTTGCTGA AGGGCAAAGA CGTTATGTGG AGAGTTTGTC TGCTTATGCA
AGGCAATTTT TAGGTCAGGT TGATAAACCA GACGTTGATT CAATTGAAGG TTTATCACCA
GCAATTTCAA TTGATCAAAA ATCAACAAGT CATAATCCGC GTTCAACAGT TGGAACAGTT
ACGGAGATAC AAGATTATTT TCGTTTGCTT TTTGGAAGAG CCGGGGAACC TCATTGCCCT
GAGTGCTCTA GGCCAATTAA GCCCCAAAGT ATAGATGAGA TGGTTGATCA AATTAAGACT
CTTCCCGAAG GATCTAGATA TCAATTACTT GCACCAGTCG TCAGAGGTAA AAAGGGAACA
CACTCAAAAT TATTATCTGG ACTTGCTGCA GAAGGGTTTG TTCGAGTAAG AATTAATAAA
GAAGTGAGAG AGTTGGCAGA TAATATTGAA TTAGATAAAA ATCAAGTTCA TTCTATTGAA
GTAGTGGTTG ATAGATTGAT TGCGAGAGAG GGTATCGAAG AGAGATTAAC TGATTCATTA
AGCACTACTT TGAAAAGGGG AGATGGTTTA GCAATCGTTG AAGTAGTCCC TAAAAAGAAC
GAAGAACTTC CTAAAGGTAT TGAAAAAGAA AGATTATTTT CTGAGAATTT CGCTTGTCCA
GTTCATGGGG CGGTAATTGA GGAATTATCT CCAAGATTAT TTTCATTTAA CAGCCCATAT
GGAGCTTGTC CTGATTGTCA TGGTTTAGGT CATTTGAAAA AATTTACTTG TGAGAGGGTT
GTACCTGACC CATCTTTACC GGTTTATGCT GCTGTTGCAC CCTGGAGTGA TAAAGATAAT
TCATATTATT TTTCATTATT ATTTTCAGTT GGCGAGGCAT TTGGTTTTGA AATAAAAACT
CCTTGGAAAG ATTTAAAAGA GGAGCAAAAA AATATTTTGT TAAATGGTAG TAAGGAACCT
ATTTTAATAA AAGTAGATAG TAGATATAAG CAAGATTCGG GATTTAAAAG ACCTTTTGAA
GGTATTTTAC CTATTTTAGA AAGACAATTA CAGGATGCGA ACGGAGAAGC TGTTCGCCAA
AAGTTAGAGA AATACCTTGA ACTAGTTCCA TGTGCAAGCT GTCATGGTAA GAGGTTACGT
CCGGAAGCAC TTGCTGTAAA GCTTGGGCCT TTTGCCATAA CTGATCTCAC TTCATCAAGT
GTTTCTACCA CTCTTGAGAA TGTTGAAGAA TTAATGGGTT TAGAAACAAC TAATAATTCA
AAGCAATTAC TTTCTAATAA ACAAAAGAAG ATTGGGGAAT TAGTCCTCAA AGAAATTCGA
TTACGGCTTC AATTTCTGTT AGATGTTGGA CTTGATTATT TAACTTTAGA TAGGCCCGCA
ATGACTTTAT CTGGGGGGGA AGCTCAAAGA ATACGCCTTG CTACGCAAAT AGGTGCTGGT
TTAACAGGAG TTCTTTATGT GTTAGATGAA CCTAGTATTG GACTACATCA AAGAGATAAT
GATCGATTAT TGTCTACATT AAAAAAGCTA CGTGATCTAG GTAATACTTT GGTGGTTGTA
GAACATGATG AAGACACGAT AAGATCAGCT GATCATTTGG TAGACATTGG ACCTGGTGCA
GGTGTGCATG GAGGTGAAAT TATAGCTCAA GGATCTTTGG ATAATTTGTT GACAGCAAAA
AAATCATTGA CGGGTGCTTA TCTTAGCGGG CGCTCATCTA TTCCTACTCC TACTAGCAGG
AGAGATTCAG TACAAAGAAA ATTACGTTTG ATTGATTGTA ATAAAAATAA TTTAAAAAAT
GTTTCAGTTG ATTTTCCATT AGGCAGATTA GTTGCTGTTA CTGGAGTAAG TGGAAGTGGT
AAAAGTACTC TGATAAATGA ATTACTTCAT CCTGCTTTAA ATCACTCTCT AGGCTTGAAA
GTTCCTTTTC CAAAAGGATT AAAAGAACTG AAAGGTATTA AATCTATTGA TAAAGTTATT
GTTATTGATC AATCTCCAAT TGGTAGAACC CCAAGATCTA ATACTGCTAC TTATACAGGT
GCATTTGATC CTATACGCCA ACTTTTTGCA ACCTCTGTTG AAGCAAAAGC CAGAGGATAT
CAAGCAGGTC AATTTAGTTT TAACGTTAAA GGTGGAAGAT GCGAAGCATG TCGTGGTCAA
GGTGTAAATG TAATTGAGAT GAATTTTCTT CCTGATGTGT ATGTTCAATG TGATGTATGT
AAAGGAGCTC GATTTAATCG CGAGACATTA CAAGTCAAAT ATAAAAACTA TTCTATTTCC
GATGTCTTAG AAATGACTGT CGAGCAAGCA GTTGATGTTT TTTCTGCTAT ACCTCAAGCT
GCAGATCGAT TAAGGACGCT TTTAGATGTT GGGCTTGGAT ATATTAAACT TGGTCAACCT
GCTCCAACAC TATCTGGAGG AGAAGCTCAA AGAGTAAAAC TTGCCACTGA GCTATCTAGA
AGAGCTACTG GTAAAACTCT TTATTTAATC GATGAGCCTA CAACTGGGTT AAGTTTTTAT
GACGTTCATA AATTAATGGA TGTTATTCAG AGATTGGTAG ACAAAGGGAA CTCAATTATT
GTTATCGAGC ATAATTTAGA TGTTATTAGG TGTTCAGATT GGATTATTGA TATGGGCCCT
GAAGGAGGTA ATAGAGGAGG AGAGATTATT GCTATGGGAA CTCCTGAAGA AGTGGCAACA
AATAAAAATA GTCATACAGG TGATTATTTA AAAAAAGTTT TAGAAATGCA CTCTTCTAGA
TAG
|
|---|
| Protein sequence | MGSPKPNSKK NALNNGSSSE DVITIRGARQ HNLKNVDLSI PRNQLVVFTG VSGSGKSSLA
FDTIFAEGQR RYVESLSAYA RQFLGQVDKP DVDSIEGLSP AISIDQKSTS HNPRSTVGTV
TEIQDYFRLL FGRAGEPHCP ECSRPIKPQS IDEMVDQIKT LPEGSRYQLL APVVRGKKGT
HSKLLSGLAA EGFVRVRINK EVRELADNIE LDKNQVHSIE VVVDRLIARE GIEERLTDSL
STTLKRGDGL AIVEVVPKKN EELPKGIEKE RLFSENFACP VHGAVIEELS PRLFSFNSPY
GACPDCHGLG HLKKFTCERV VPDPSLPVYA AVAPWSDKDN SYYFSLLFSV GEAFGFEIKT
PWKDLKEEQK NILLNGSKEP ILIKVDSRYK QDSGFKRPFE GILPILERQL QDANGEAVRQ
KLEKYLELVP CASCHGKRLR PEALAVKLGP FAITDLTSSS VSTTLENVEE LMGLETTNNS
KQLLSNKQKK IGELVLKEIR LRLQFLLDVG LDYLTLDRPA MTLSGGEAQR IRLATQIGAG
LTGVLYVLDE PSIGLHQRDN DRLLSTLKKL RDLGNTLVVV EHDEDTIRSA DHLVDIGPGA
GVHGGEIIAQ GSLDNLLTAK KSLTGAYLSG RSSIPTPTSR RDSVQRKLRL IDCNKNNLKN
VSVDFPLGRL VAVTGVSGSG KSTLINELLH PALNHSLGLK VPFPKGLKEL KGIKSIDKVI
VIDQSPIGRT PRSNTATYTG AFDPIRQLFA TSVEAKARGY QAGQFSFNVK GGRCEACRGQ
GVNVIEMNFL PDVYVQCDVC KGARFNRETL QVKYKNYSIS DVLEMTVEQA VDVFSAIPQA
ADRLRTLLDV GLGYIKLGQP APTLSGGEAQ RVKLATELSR RATGKTLYLI DEPTTGLSFY
DVHKLMDVIQ RLVDKGNSII VIEHNLDVIR CSDWIIDMGP EGGNRGGEII AMGTPEEVAT
NKNSHTGDYL KKVLEMHSSR
|
|---|
| |