Gene PMN2A_1303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1303 
Symbol 
ID3606698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1810776 
End bp1812020 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content37% 
IMG OID637688180 
Productmajor facilitator superfamily permease 
Protein accessionYP_292496 
Protein GI72383141 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGAAGGC TAAAAATTCC CACCCTTTTA GGAGCTTTCA TCACACTTCT AGATGATCGA 
TTAGGCGAAA CCATTGTTTT ACCTTTATTA CCTTTTTTAT TAGAACAATT CACGACAAGC
GCGACGACTC TTGGTTTTTT AACTGGAACT TATGCGATAT CTCAGTTTGC TGCAGCCCCA
CTAATTGGAG CTATGAGTGA TCGTTTCGGT CGTAAGCCAA TCATGATCAC ATGTGTATCT
GGTTCAGTAA TAGGAATATG TCTATTTGCA TTAACTGTAA GCCTGAATTG GGATAATTAT
TTACCTTTAT GGGCCTCAAC TTTACCTTTA TCTTTACTAT TTTTAGCCAG AATAATTGAT
GGTATCAGTG GCGGTACTGC AGCTACTGCT ACTACAATAC TTGCAGACAT ATCAACTCCC
GAAAATCGCG CAAAAACCTT TGGATTAATT GGAGTAGCGT TTGGTTTGGG TTTTATTCTT
GGGCCAGGAT TAGGAACAGC TCTTGCTAAA TTTAGTGTCA CTTTACCGGT ATGGGTCGCA
AGCGGATTTG CAATATTTAA TCTTATTTTT GTAATTTTCT TTTTACCGGA AACACTGCCC
AAAAACAAAA GAAATTTATT ACCAAGAAAA AGAGATTTGA ATCCAATCAG TCAGCTCTTG
ATTGTATTCA AAAACCCCTT AGCTAGAAGA CTTTGCTTAT CATTTTTTGT TTTCTTTATG
GCATTTAATG GCTTTACAGC TGTTTTAGTC CTTTATTTAA AAGAAAAATT TGGATGGAGT
CCTGAATTAT GTAGTGCTGC TTTTATTGTC GTTGGAGTTA TCGCGATGAT TGTTCAAGGA
GGCCTAATTG GTCCTCTTGT AAAAAGATTT GGGGAGTCGA GATTAACTTT TGCTGGTATT
GGCTTTGTAA TGACAGGATG TATTCTTTTA ACTCTCGCAA ATATAGATAC GTCAATTCCT
CTTGTATTTT CTGGCGTCGC AATACTTGCA ATGGGAACTG GACTAGTAAC TCCTAGTTTA
AGAGCACTAA TTTCAAGAAG ACTAAGTTCT ATTGGTCAAG GAGCAGTATT GGGAAATCTG
CAGGGTTTAC AAAGTCTGGG AACTTTTCTT GGAGCAATAG CAGCAGGACG CTCATATGAT
CTTTTGGGTC CAAGAAGTCC ATTCTTTGGC ACAATATTGC TTCTAATATT TGTTATGTTT
TTAATTTCAG GGAAAAGTCT TACCAAGCAA AAAGTAATCT CCTAG
 
Protein sequence
MRRLKIPTLL GAFITLLDDR LGETIVLPLL PFLLEQFTTS ATTLGFLTGT YAISQFAAAP 
LIGAMSDRFG RKPIMITCVS GSVIGICLFA LTVSLNWDNY LPLWASTLPL SLLFLARIID
GISGGTAATA TTILADISTP ENRAKTFGLI GVAFGLGFIL GPGLGTALAK FSVTLPVWVA
SGFAIFNLIF VIFFLPETLP KNKRNLLPRK RDLNPISQLL IVFKNPLARR LCLSFFVFFM
AFNGFTAVLV LYLKEKFGWS PELCSAAFIV VGVIAMIVQG GLIGPLVKRF GESRLTFAGI
GFVMTGCILL TLANIDTSIP LVFSGVAILA MGTGLVTPSL RALISRRLSS IGQGAVLGNL
QGLQSLGTFL GAIAAGRSYD LLGPRSPFFG TILLLIFVMF LISGKSLTKQ KVIS