| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1216 |
|---|
| Symbol | |
|---|
| ID | 3606609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | + |
|---|
| Start bp | 1702489 |
|---|
| End bp | 1703478 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637688091 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_292409 |
|---|
| Protein GI | 72383054 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1725] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGATTCC ACATACAACA GGACAGTGAA ATCCCGGCAT CAAGCCAGTT ATATAACCAA
GTTTGTTTTG CTATTGCAGC AAGACATTAC CCACCTGGAC ATAGGTTGCC CAGTACTAGG
CAACTTGCGA TGCAAACTGG TTTACATCGA AATACTATAA GCAAAGTCTA TAGACAGCTA
GAAAAAGATG GAGTTGTTGA AGCTATTGCA GGTTCAGGTA TTTATGTTCG GGATCAGCAA
AAACAAAAAG ATTTAAGAAG TAGCTCTCAT GCACTACGTA AAAAAGGTAT CCAAGATATA
GACCATGAAG TCCGTAAAAG TATTGATGAA CTTTTAAATA CGGGATGCAC CTTGCAGCAA
ACGAGAGAAT TATTTACCCG TGAAATTGAT TGGAGGCTGA GATGCGGAGC TCGCTTACTT
GTTAGTACTC CTAGAGAAGA TATTGGAGCA TCATTACTAA TTGCTGAAGA ATTGGCTCCT
CATTTAGATG TCCCAGTCGA GGTTGTTCCA ATGGAAGAAC TAGAGAGTGT TTTAGAAAGC
TCAAGCAAAG GAACAGTCGT GACAAGCAGA TATTTCTTAC AGCCTTTGGA AGAATTAGCA
AACCGACATC AAGTTCGAGC TGTCGCTGTA GATCTCAGCG ATTTTCAAAA AGAACTAACC
ATATTAAAAA AACTTCGCTC AGGCAGTTGT GTAGGAATAG TTAGTATTAG CCCAGGAATA
TTAAGAGCAG CAGAGGTTAT TTTACACAGT ATGCGAGGCA ACGAATTACT TTTGATGACT
GCAAATCCCG ATGTAGGTAG TAGATTAATA GCTTTACTAA GGGCTGCCAG TCATGTGATT
TGTGACAGCC CAAGCCTTCC TCTTGTGGAA CATACTCTCA GGCAAAATCG TTCACAATTA
ATGCGCATGC CTCAAATACA TTGTGCACAT AAATATCTTA GTGACTCTAC AATTGAGGAG
CTTCGAAAAG AGATTGGTCT CTTAGAGTAA
|
|---|
| Protein sequence | MRFHIQQDSE IPASSQLYNQ VCFAIAARHY PPGHRLPSTR QLAMQTGLHR NTISKVYRQL
EKDGVVEAIA GSGIYVRDQQ KQKDLRSSSH ALRKKGIQDI DHEVRKSIDE LLNTGCTLQQ
TRELFTREID WRLRCGARLL VSTPREDIGA SLLIAEELAP HLDVPVEVVP MEELESVLES
SSKGTVVTSR YFLQPLEELA NRHQVRAVAV DLSDFQKELT ILKKLRSGSC VGIVSISPGI
LRAAEVILHS MRGNELLLMT ANPDVGSRLI ALLRAASHVI CDSPSLPLVE HTLRQNRSQL
MRMPQIHCAH KYLSDSTIEE LRKEIGLLE
|
|---|
| |