Gene PMN2A_1215 details

Gene Information

• Locus tag: PMN2A_1215
• Symbol: infC
• ID: 3606608
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. NATL2A
• Kingdom: Bacteria
• Replicon accession: NC_007335
• Strand: +
• Start bp: 1701789
• End bp: 1702397
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637688090
• Product: translation initiation factor IF-3
• Protein accession: YP_292408
• Protein GI: 72383053
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0290] Translation initiation factor 3 (IF-3)
• TIGRFAM ID: [TIGR00168] translation initiation factor IF-3

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCACCAC GTCCCCGTTT TGATCGTCGC GCTCCAGAAA GGGAGTTGCC CAATATTAAT 
GAAAGAATCA GCTATTCGAG CTTGAGGGTT GTTGATTCAG ATGGCACTCA ACTTGGAGTC 
ATCAGTCGCG AGGACGCTTT AGAGGTCGCT AAAGAGAGAG AATTAGATCT TGTTCTAGTA 
AGTGAGAAGG CGACTCCTCC TGTATGCCGA ATAATGAATT ATGGGAAATT TAAGTTTGAG 
CAAGAAAAAA AAGCAAAAGA AGCTAAGAAA AAATCACATC AAACAGAAGT TAAAGAAGTA 
AAAATGAGGT ATAAAATTGA TCAGCATGAT TATCAGGTCC GTATTAGTCA GGCCACTAGA 
TTCTTAAAGG CTGGAGATAA AGTCAAATGC ACAGTTATAT TTAGAGGCCG CGAAATTCAA 
CATACTGCTC TAGCAGAGAC ACTTTTAAAA AGAATGGCCA AGGATTTGGA AGAAAAGGCT 
GAAGTACAAC AATCGCCCAA AAGAGAGGGA AGAAATATGA TCATGTTTTT AACTCCGCGT 
AAAACTCCTC TTTTAAAGAA AGAGAGTGAA ATAACTGAGC CCAAAAAAGC TTTGAGAACA 
ATTGATTAA 

 

Protein sequence

MPPRPRFDRR APERELPNIN ERISYSSLRV VDSDGTQLGV ISREDALEVA KERELDLVLV 
SEKATPPVCR IMNYGKFKFE QEKKAKEAKK KSHQTEVKEV KMRYKIDQHD YQVRISQATR 
FLKAGDKVKC TVIFRGREIQ HTALAETLLK RMAKDLEEKA EVQQSPKREG RNMIMFLTPR 
KTPLLKKESE ITEPKKALRT ID