Gene PMN2A_1157 details

Gene Information

• Locus tag: PMN2A_1157
• ID: 3606547
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. NATL2A
• Kingdom: Bacteria
• Replicon accession: NC_007335
• Strand: +
• Start bp: 1646084
• End bp: 1646728
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637688030
• Product: putative ribonuclease D
• Protein accession: YP_292350
• Protein GI: 72382995
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0349] Ribonuclease D

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAAAA AAACCGATGA ACCCTCGACT TTCAATATCT TTGATCAAGA CATAGATAGT 
GAAACTGAGA TTGCTTTAAG ATCATCTTCA GCTTTAGCAG TTGATACCGA AGCCATGGGA 
TTAATTCATG GTAGAGATCG GCTTTGTTTA ATACAAATAT GTGATGAATT TGATAATGTT 
ATTTGTATTC GTATAGAACG AAATCAACAT TCAGCACCAC ACTTAAAATC TATTCTTGAG 
AACAAAACAA TTGAAAAAGT CTTTCATTTT GCAAGATTTG ATGTCGCTGC CTTAGCAAGT 
AATCTCAATA TTAATGTTAA TCCAATTTTT TGTACAAAAA TCGCAAGTAA AATAGGAAGA 
ACTTATAGTC CAAGGCATGG ATTAAAAGAA GTAGTTTTGG AGACTGTTGG AGTGGAATTA 
GACAAACAAG CTCAAAGCAG TGACTGGGGA AAAGTTGGTG ATTTAACTCA AAAACAACTT 
ATCTATGCTT CAAATGATGT TAGATATTTA CTAGGCGCAA AACACAAACT TGAAGAGATG 
TTGAAACGTG AAGAAAGATG GGGATTAGCC CAAAAATGTT TCCAATGCGT ACCAGTTTTG 
TCCGAGCTTG ATAGAAGAAG ATTTACAAAT ATTTTTGATC ATTAA 

 

Protein sequence

MPKKTDEPST FNIFDQDIDS ETEIALRSSS ALAVDTEAMG LIHGRDRLCL IQICDEFDNV 
ICIRIERNQH SAPHLKSILE NKTIEKVFHF ARFDVAALAS NLNINVNPIF CTKIASKIGR 
TYSPRHGLKE VVLETVGVEL DKQAQSSDWG KVGDLTQKQL IYASNDVRYL LGAKHKLEEM 
LKREERWGLA QKCFQCVPVL SELDRRRFTN IFDH